Mercurial > repos > charles_s_test > seqsero2

diff libs/deletion_compare.py @ 10:53efef402c51 draft

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planemo upload commit a4fb57231f274270afbfebd47f67df05babffa4a-dirty
author charles_s_test
date Wed, 29 Nov 2017 08:34:19 -0500
parents 3d6680af0bec
children
line wrap: on
line diff
--- a/libs/deletion_compare.py	Tue Nov 28 21:16:36 2017 -0500
+++ b/libs/deletion_compare.py	Wed Nov 29 08:34:19 2017 -0500
@@ -120,15 +120,15 @@
         O2_bigger+=1
     except:
       continue
-  print("$$$Genome:",sra_name)
+  print "$$$Genome:",sra_name
   if O9_bigger>O2_bigger:
-    print("$$$Typhimurium")
+    print "$$$Typhimurium"
   elif O9_bigger<O2_bigger:
-    print("$$$Typhimurium_O5-")
+    print "$$$Typhimurium_O5-"
   else:
-    print("$$$Typhimurium, even no 7 bases difference")
-  print("O-4 number is:",O9_bigger)
-  print("O-4_5- number is:",O2_bigger)
+    print "$$$Typhimurium, even no 7 bases difference"
+  print "O-4 number is:",O9_bigger
+  print "O-4_5- number is:",O2_bigger
   os.system("rm "+sam+"_title.txt")###01/28/2015
   os.system("rm "+sam+"_seq.txt")###01/28/2015
   os.system("rm "+sam+".fasta")###01/28/2015