Mercurial > repos > charles_s_test > seqsero2
comparison test.txt @ 2:0d65b71ff8df draft
planemo upload commit 464b391afaa5819bc681452e85bea9d882730eb6
| author | charles_s_test |
|---|---|
| date | Sun, 12 Nov 2017 02:27:32 -0500 |
| parents | 8cd7fc65c3a7 |
| children | 38ad1130d077 |
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| 1:8cd7fc65c3a7 | 2:0d65b71ff8df |
|---|---|
| 1 monkey /nfs/sw/apps/galaxy-dev/galaxy/tools/seqsero/run_seqsero_batch_galaxy.py /nfs/sw/apps/galaxy-dev/galaxy/database/files/000/dataset_304.dat | 1 monkey /nfs/sw/apps/galaxy-prd/galaxy/tools/seqsero/run_seqsero_batch_galaxy.py /nfs/sw/apps/galaxy-prd/galaxy/database/files/001/dataset_1643.dat,/nfs/sw/apps/galaxy-prd/galaxy/database/files/001/dataset_1644.dat |
| 2 2 | 2 2 |
| 3 /nfs/sw/apps/galaxy-dev/galaxy/tools/seqsero/run_seqsero_batch_galaxy.py /nfs/sw/apps/galaxy-dev/galaxy/database/files/000/dataset_304.dat | 3 /nfs/sw/apps/galaxy-prd/galaxy/tools/seqsero/run_seqsero_batch_galaxy.py /nfs/sw/apps/galaxy-prd/galaxy/database/files/001/dataset_1643.dat,/nfs/sw/apps/galaxy-prd/galaxy/database/files/001/dataset_1644.dat |
| 4 2 | 4 2 |
| 5 1 | 5 2 |
| 6 | 6 |
| 7 | 7 |
| 8 | 8 |
| 9 Input files: dataset_304_F1605001-005-2C1.fsa | 9 Input files: dataset_1643_SRR6232093_1.fastq dataset_1644_SRR6232093_2.fastq |
| 10 O antigen prediction: O-? | 10 O antigen prediction: O-- |
| 11 H1 antigen prediction(fliC): - | 11 H1 antigen prediction(fliC): - |
| 12 H2 antigen prediction(fljB): - | 12 H2 antigen prediction(fljB): - |
| 13 Predicted antigenic profile: ?:-:- | 13 Predicted antigenic profile: -:-:- |
| 14 Predicted serotype(s): N/A (The predicted antigenic profile does not exist in the White-Kauffmann-Le Minor scheme) | 14 Predicted serotype(s): N/A (The predicted antigenic profile does not exist in the White-Kauffmann-Le Minor scheme) |
| 15 | 15 |
| 16 /nfs/sw/apps/galaxy-dev/galaxy/tools/seqsero/fastq_tmp/dataset_304_F1605001-005-2C1.fsa | 16 check fastq id and make them in accordance with each other...please wait... |
| 17 | 17 |
| 18 | 18 |
| 19 | 19 |
| 20 Result: | 20 Result: |
| 21 | 21 |
| 22 | 22 |
| 23 None | 23 None |
| 24 Fri Oct 27 15:35:33 2017 | 24 Wed Nov 8 06:26:06 2017 |