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annotate Seqsero_result.txt @ 2:0d65b71ff8df draft

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planemo upload commit 464b391afaa5819bc681452e85bea9d882730eb6
author charles_s_test
date Sun, 12 Nov 2017 02:27:32 -0500
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6895de35a263 planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
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1 Input_Files O_antigen_prediction H1_antigen_prediction(fliC) H2_antigen_prediction(fljB) Predicted_antigenic_profile Predicted_serotype(s)
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0d65b71ff8df planemo upload commit 464b391afaa5819bc681452e85bea9d882730eb6
charles_s_test
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2 dataset_445_SRR6158764_1.fastq dataset_446_SRR6158764_2.fastq O-7 y 1,5 7:y:1,5 Bareilly
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6895de35a263 planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
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0d65b71ff8df planemo upload commit 464b391afaa5819bc681452e85bea9d882730eb6
charles_s_test
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4 dataset_445_SRR6158764_1.fastq dataset_446_SRR6158764_2.fastq
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6895de35a263 planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
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5 The serotype(s) is/are the only serotype(s) with the indicated antigenic profile currently recognized in the Kauffmann White Scheme. New serotypes can emerge and the possibility exists that this antigenic profile may emerge in a different subspecies. Identification of strains to the subspecies level should accompany serotype determination; the same antigenic profile in different subspecies is considered different serotypes.
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0d65b71ff8df planemo upload commit 464b391afaa5819bc681452e85bea9d882730eb6
charles_s_test
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6 check fastq id and make them in accordance with each other...please wait...