Mercurial > repos > charles_s_test > seqsero
annotate psql_test.py @ 0:8db411fab3e1 draft
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
| author | charles_s_test |
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| date | Thu, 19 Oct 2017 18:20:46 -0400 |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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1 import psycopg2, os |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
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2 |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
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3 os.system('source /nfs/sw/apps/galaxy-dev/galaxy/.venv/bin/activate') |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
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4 |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
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5 connection = psycopg2.connect(database="galaxy", user="galaxy", host="galaxydev.cvkyaz9id4ml.us-east-1.rds.amazonaws.com", password="cF$cl0udh9c", port="5432") |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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6 print "monkey made a connection!" |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
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7 |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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8 worker = connection.cursor() |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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9 worker.execute('SELECT name FROM library_dataset_dataset_association WHERE dataset_id = 4;') |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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10 result = worker.fetchall() |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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11 print result, '4' |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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12 |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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13 worker = connection.cursor() |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
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14 worker.execute('SELECT name FROM library_dataset_dataset_association WHERE dataset_id = 10;') |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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15 result = worker.fetchall() |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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16 print result, '10' |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
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17 |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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18 worker = connection.cursor() |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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19 worker.execute('SELECT name FROM library_dataset_dataset_association WHERE dataset_id = 11;') |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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20 result = worker.fetchall() |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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21 print result, '11' |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
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22 |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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23 worker = connection.cursor() |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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24 worker.execute('SELECT name FROM library_dataset_dataset_association WHERE dataset_id = 18;') |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
charles_s_test
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25 result = worker.fetchall() |
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8db411fab3e1
planemo upload commit 844a891e4eaf732830043204ac636907eefb011d-dirty
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26 print result, '18' |
