annotate TrustStoreGalaxyBrowse.xml @ 27:901b359bb74a

We are getting closer.
author Catherine Wise <catherine.wise@csiro.au>
date Thu, 14 May 2015 15:36:42 +1000
parents 589f9250e30f
children a325622e2277
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
10
16b0ceecf1f7 * Open in new window/tab * Apparently URL has to be capitalised (why... who knows, there's no docs).
Catherine Wise <catherine.wise@csiro.au>
parents: 9
diff changeset
1 <?xml version="1.0"?>
16b0ceecf1f7 * Open in new window/tab * Apparently URL has to be capitalised (why... who knows, there's no docs).
Catherine Wise <catherine.wise@csiro.au>
parents: 9
diff changeset
2 <tool id="ts_import_2" name="Browse Data from TrustStore" tool_type="data_source" version="0.5.1" force_history_refresh="True">
16b0ceecf1f7 * Open in new window/tab * Apparently URL has to be capitalised (why... who knows, there's no docs).
Catherine Wise <catherine.wise@csiro.au>
parents: 9
diff changeset
3 <description>secure cloud storage.</description>
0
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
4 <stdio>
9
0f2a5664c9eb Actually update downloader (probably not working).
Catherine Wise <catherine.wise@csiro.au>
parents: 8
diff changeset
5 <exit_code range="2" err_level="fatal" description="Could not find store with given ID, or don't have access rights." />
0f2a5664c9eb Actually update downloader (probably not working).
Catherine Wise <catherine.wise@csiro.au>
parents: 8
diff changeset
6 <exit_code range="3" err_level="fatal" description="Could not find path in store." />
0f2a5664c9eb Actually update downloader (probably not working).
Catherine Wise <catherine.wise@csiro.au>
parents: 8
diff changeset
7 <exit_code range="4" err_level="fatal" description="Could not find matching file in store." />
0
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
8 <exit_code range="5" err_level="fatal" description="Bad credentials supplied. See stdout for more information." />
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
9 </stdio>
14
589f9250e30f Fix son reading.
Catherine Wise <catherine.wise@csiro.au>
parents: 12
diff changeset
10 <command interpreter="python">TrustStoreGalaxyBrowse.py $output</command>
10
16b0ceecf1f7 * Open in new window/tab * Apparently URL has to be capitalised (why... who knows, there's no docs).
Catherine Wise <catherine.wise@csiro.au>
parents: 9
diff changeset
11 <inputs action="https://tstest-kms.it.csiro.au/kmscolab_3_0/login" check_values="false" method="get" target="_blank">
16b0ceecf1f7 * Open in new window/tab * Apparently URL has to be capitalised (why... who knows, there's no docs).
Catherine Wise <catherine.wise@csiro.au>
parents: 9
diff changeset
12 <display>go to TrustStore server $GALAXY_URL</display>
0
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
13 <!--<param name="appCallbackUrl" type="baseurl" value="/tool_runner?tool_id=ts_import_2" />-->
8
96847f227d20 Callback url still not right.
Catherine Wise <catherine.wise@csiro.au>
parents: 7
diff changeset
14 <param name="GALAXY_URL" type="baseurl" value="/tool_runner?tool_id=testtoolshed.g2.bx.psu.edu%2Frepos%2Fcathywise%2Ftruststore_browse_testing%2Fts_import_2%2F0.5" />
10
16b0ceecf1f7 * Open in new window/tab * Apparently URL has to be capitalised (why... who knows, there's no docs).
Catherine Wise <catherine.wise@csiro.au>
parents: 9
diff changeset
15 <!-- <param name="GALAXY_URL" type="baseurl" value="/tool_runner" />
16b0ceecf1f7 * Open in new window/tab * Apparently URL has to be capitalised (why... who knows, there's no docs).
Catherine Wise <catherine.wise@csiro.au>
parents: 9
diff changeset
16 <param name="tool_id" type="hidden" value="ts_import_2" /> -->
0
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
17 </inputs>
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
18 <request_param_translation>
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
19 <request_param galaxy_name="url" remote_name="url" missing="" />
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
20 </request_param_translation>
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
21 <outputs>
9
0f2a5664c9eb Actually update downloader (probably not working).
Catherine Wise <catherine.wise@csiro.au>
parents: 8
diff changeset
22 <data name="output" format="auto" />
0
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
23 </outputs>
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
24 <uihints minwidth="800"/>
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
25 <options sanitize="False" refresh="True"/>
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
26
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
27 <requirements>
9
0f2a5664c9eb Actually update downloader (probably not working).
Catherine Wise <catherine.wise@csiro.au>
parents: 8
diff changeset
28 <requirement type="package" version="0.5.1">py_ts</requirement>
0
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
29 <requirement type="python_module">py_ts</requirement>
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
30 <requirement type="binary" version="1.0.0">openssl</requirement>
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
31 </requirements>
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
32
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
33 <help>
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
34 This tool lets users import data they have uploaded to the TrustStore system.
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
35
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
36 Upload files to TrustStore using the desktop client.
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
37 </help>
2a996fea49a3 Initial.
Catherine Wise <catherine.wise@csiro.au>
parents:
diff changeset
38 </tool>