diff TrustStoreGalaxyBrowse.xml @ 9:0f2a5664c9eb

Actually update downloader (probably not working).
author Catherine Wise <catherine.wise@csiro.au>
date Tue, 12 May 2015 11:35:04 +1000
parents 96847f227d20
children 16b0ceecf1f7
line wrap: on
line diff
--- a/TrustStoreGalaxyBrowse.xml	Mon May 11 15:31:52 2015 +1000
+++ b/TrustStoreGalaxyBrowse.xml	Tue May 12 11:35:04 2015 +1000
@@ -1,14 +1,14 @@
 <tool id="ts_import_2" name="Browse Data from TrustStore" tool_type="data_source" version="0.5" force_history_refresh="True"> <!-- tool_type="data_source"> -->
     <description> secure cloud storage.</description>
     <stdio>
-        <exit_code range="2" err_level="fatal" description="Could not find store with supplied name." />
-        <exit_code range="3" err_level="fatal" description="Could not find supplied path in store." />
-        <exit_code range="4" err_level="fatal" description="Could not find supplied filename in store at path." />
+        <exit_code range="2" err_level="fatal" description="Could not find store with given ID, or don't have access rights." />
+        <exit_code range="3" err_level="fatal" description="Could not find path in store." />
+        <exit_code range="4" err_level="fatal" description="Could not find matching file in store." />
         <exit_code range="5" err_level="fatal" description="Bad credentials supplied. See stdout for more information." />
     </stdio>
-    <command interpreter="python">TrustStoreGalaxyImport.py $url</command>
-    <inputs action="https://tstest-kms.it.csiro.au/kmscolab_3_0/login" check_values="false" method="get">
-        <display>go to TrustStore server</display>
+    <command interpreter="python">TrustStoreGalaxyImport.py $output "."</command>
+    <inputs action="https://tstest-kms.it.csiro.au/kmscolab_3_0/login" check_values="false" method="get" target="_top">
+        <display>go to TrustStore server $GALAXY_URL $tool_id</display>
         <!--<param name="appCallbackUrl" type="baseurl" value="/tool_runner?tool_id=ts_import_2" />-->
         <param name="GALAXY_URL" type="baseurl" value="/tool_runner?tool_id=testtoolshed.g2.bx.psu.edu%2Frepos%2Fcathywise%2Ftruststore_browse_testing%2Fts_import_2%2F0.5" />
     </inputs>
@@ -16,13 +16,13 @@
         <request_param galaxy_name="url" remote_name="url" missing="" />
     </request_param_translation>
     <outputs>
-        <data name="output1" format="auto" />
+        <data name="output" format="auto" />
     </outputs>
     <uihints minwidth="800"/>
     <options sanitize="False" refresh="True"/>
 
     <requirements>
-        <requirement type="package" version="0.5">py_ts</requirement>
+        <requirement type="package" version="0.5.1">py_ts</requirement>
         <requirement type="python_module">py_ts</requirement>
         <requirement type="binary" version="1.0.0">openssl</requirement>
     </requirements>