Mercurial > repos > blankenberglab > gpca

changeset 4:ceaa4d404115 draft default tip

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planemo upload for repository https://github.com/blankenberglab/galaxy-tools-blankenberg/tree/master/tools/r-gpca commit 9ad682131963a72c88a5af1cfc99f90ea9d42a08
author blankenberglab
date Mon, 03 Dec 2018 15:07:32 -0500
parents 8def7dda3bee
children
files r-gpca.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/r-gpca.xml	Mon Dec 03 15:04:08 2018 -0500
+++ b/r-gpca.xml	Mon Dec 03 15:07:32 2018 -0500
@@ -4,7 +4,7 @@
         <requirement type="package" version="1.0">r-gpca</requirement>
         <requirement type="package" version="1.6.0">r-optparse</requirement>
     </requirements>
-    <version_command><![CDATA['$__tool_directory__/r-gpca.R' --version]]></version_command>
+    <version_command><![CDATA[Rscript '$__tool_directory__/r-gpca.R' --version]]></version_command>
     <command detect_errors="exit_code">
     <![CDATA[
       
@@ -65,7 +65,7 @@
           <extra_files type="file" name="unguided_var_1.png" value="html_outfile_1/unguided_var_1.png" 
             compare="sim_size"/>
         </output>
-        <output name="numbers_outfile_1.tabular" ftype="tabular" file="numbers_outfile_1.tabular"/>
+        <output name="numbers_outfile" ftype="tabular" file="numbers_outfile_1.tabular"/>
       </test>
       <test>
         <param name="batch" ftype="tabular" value="batch_in_multiple_1.tabular"  />
@@ -96,7 +96,7 @@
           <extra_files type="file" name="unguided_var_2.png" value="html_outfile_2/unguided_var_2.png" 
             compare="sim_size"/>
         </output>
-        <output name="numbers_outfile_2.tabular" ftype="tabular" file="numbers_outfile_2.tabular"/>
+        <output name="numbers_outfile" ftype="tabular" file="numbers_outfile_2.tabular"/>
       </test>
     </tests>