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comparison data_manager_conf.xml @ 4:926e50397b83 default tip

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Add abspath value translation to data_manager_conf.xml.
author Daniel Blankenberg <dan@bx.psu.edu>
date Tue, 04 Jun 2013 14:57:33 -0400
parents 2c5dc42b31b6
children
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3:25f3d405aa01 4:926e50397b83
10 <move type="directory" relativize_symlinks="True"> 10 <move type="directory" relativize_symlinks="True">
11 <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> 11 <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/sam_index/${value}</target> 12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/sam_index/${value}</target>
13 </move> 13 </move>
14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/sam_index/${value}/${path}</value_translation> 14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/sam_index/${value}/${path}</value_translation>
15 <value_translation type="function">abspath</value_translation>
15 </column> 16 </column>
16 </output> 17 </output>
17 </data_table> 18 </data_table>
18 </data_manager> 19 </data_manager>
19 20