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author biomonika <biomonika@psu.edu>
date Thu, 28 Aug 2014 14:44:13 -0400
parents c0eaad1712e0
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1 <tool id="test_dependency" name="test_dependency">
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2 <description>Test toolshed dependency</description>
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3 <requirements>
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4 <requirement type="set_environment">LINKYX_PATH</requirement>
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5 <requirement type="set_environment">SAMTOOLS</requirement>
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6 <requirement type="package" version="0.1.19">samtools</requirement>
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7 </requirements>
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8 <command interpreter="bash">test_dependency.sh $output $input1</command>
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9 <inputs>
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10 <param format="fastq" name="input1" type="data" label="Reference"/>
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11 </inputs>
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12 <outputs>
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13 <data format="txt" name="output" />
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14 </outputs>
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16 <tests>
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17 <test>
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18 <output name="out_file1" file="Y_results.txt"/>
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19 </test>
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20 </tests>
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22 <help>
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23 Test dependency
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24 </help>
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26 </tool>