Mercurial > repos > biomonika > primer_tester
changeset 1:3a58793617ef draft default tip
Uploaded
author | biomonika |
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date | Fri, 25 Jul 2014 17:11:18 -0400 |
parents | 1e22519d75ac |
children | |
files | primer_tester.xml |
diffstat | 1 files changed, 25 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/primer_tester.xml Fri Jul 25 17:11:18 2014 -0400 @@ -0,0 +1,25 @@ +<tool id="primer_tester" name="primer_tester"> + 2 <description>for each sequence in a file</description> + 3 <command interpreter="perl">primer_tester.sh $input $output $input1 $input2 $input3</command> + 4 <inputs> + 5 <param format="tabular" name="input" type="data" label="Primers"/> + <param format="primersearch" name="input1" type="data" label="Data file 1"/> + <param format="primersearch" name="input2" type="data" label="Data file 2"/> + <param format="primersearch" name="input3" type="data" label="Data file 3"/> + 6 </inputs> + 7 <outputs> + 8 <data format="tabular" name="output" /> + 9 </outputs> + 10 + 11 <tests> + 12 <test> + 13 <param name="input" value="primer_tester_content_input.fa"/> + 14 <output name="out_file1" file="primersearch_results.txt"/> + 15 </test> + 16 </tests> + 17 + 18 <help> + 19 This tool tests if primers are present in gorilla female or on human Y or chimp Y chromosome. + 20 </help> + 21 + 22 </tool> \ No newline at end of file