Mercurial > repos > biomonika > monika_mpileup

changeset 19:765e16c11fb3 draft

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Uploaded
author biomonika
date Wed, 13 Aug 2014 23:13:35 -0400
parents b8955b7521b1
children 2a0671e8cb5e
files tool_dependencies.xml
diffstat 1 files changed, 23 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Wed Aug 13 23:13:35 2014 -0400
@@ -0,0 +1,23 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="perl" version="5.18.1">
+        <repository changeset_revision="a1a111b9faa5" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="bioperl" version="1.6.922">
+        <install version="1.0">
+            <actions>
+                <action type="setup_perl_environment">
+                    <repository changeset_revision="091a97f8c585" name="package_perl_5_18" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
+                        <package name="perl" version="5.18.1" />
+                    </repository>
+                   <!-- allow downloading and installing an Perl package from cpan.org-->
+                   <package>Bio::DB::Sam</package>
+                   <package>http://search.cpan.org/CPAN/authors/id/L/LD/LDS/Bio-SamTools-1.39.tar.gz</package>
+                </action>
+            </actions>
+        </install>
+        <readme>
+            Bundle::BioPerl
+        </readme>
+    </package>
+</tool_dependency>