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annotate scripts/reformat_trinity_header.xml @ 2:c35c3c6a543e

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updated dependencies
author biomonika <biomonika@psu.edu>
date Tue, 02 Sep 2014 15:23:27 -0400
parents 1955f03f092e
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
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biomonika <biomonika@psu.edu>
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1 <tool id="reformat_trinity_header" name="reformat_trinity_header">
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2 <description>Reformat Trinity header</description>
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3 <command interpreter="bash">reformat_trinity_header.sh $output $input1</command>
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4 <inputs>
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5 <param format="fasta" name="input1" type="data" label="Trinity.fasta"/>
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6 </inputs>
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7 <outputs>
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8 <data format="fasta" name="output" />
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9 </outputs>
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10
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11 <tests>
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12 <test>
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13 <output name="out_file1" file="Trinity.fasta"/>
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14 </test>
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15 </tests>
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16
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17 <help>
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18 Reformat Trinity header, keep only part until first space.
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19 </help>
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20
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21 </tool>