Mercurial > repos > biomonika > linkyx

diff scripts/reformat_trinity_header.xml @ 0:1955f03f092e

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
initial commit
author biomonika <biomonika@psu.edu>
date Tue, 02 Sep 2014 14:16:04 -0400
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/scripts/reformat_trinity_header.xml	Tue Sep 02 14:16:04 2014 -0400
@@ -0,0 +1,21 @@
+<tool id="reformat_trinity_header" name="reformat_trinity_header">
+      <description>Reformat Trinity header</description>
+      <command interpreter="bash">reformat_trinity_header.sh $output $input1</command>
+      <inputs>
+        <param format="fasta" name="input1" type="data" label="Trinity.fasta"/>
+      </inputs>
+      <outputs>
+        <data format="fasta" name="output" />
+      </outputs>
+  
+     <tests>
+       <test>
+        <output name="out_file1" file="Trinity.fasta"/>
+       </test>
+     </tests>
+   
+     <help>
+   Reformat Trinity header, keep only part until first space.
+     </help>
+   
+   </tool>
\ No newline at end of file