Mercurial > repos > bgruening > upload_testing
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Uploaded
author | bernhardlutz |
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date | Thu, 23 Jan 2014 14:53:46 -0500 |
parents | c4a3a8999945 |
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Galaxy wrapper using R and RPy2 =============================== These wrappers are based on RPy1 versions included in Galaxy-Main and ported by John Chilton to RPy2. Please see the following Mail from galaxy-dev: http://lists.bx.psu.edu/pipermail/galaxy-dev/2013-May/014694.html Missing ports to RPy2: - rgenetics/rgQC.py - regVariation/rcve.py - ngs_simulation/ngs_simulation.py - metag_tools/short_reads_figure_high_quality_length.py - taxonomy/poisson2test.py ToDo: - add tool_dependencies.xml to RPy2 and R-3.0 - testing - porting of missing tools ============ Installation ============ ======= History ======= - v0.1: no release yet Wrapper Licence (MIT/BSD style) =============================== Permission to use, copy, modify, and distribute this software and its documentation with or without modifications and for any purpose and without fee is hereby granted, provided that any copyright notices appear in all copies and that both those copyright notices and this permission notice appear in supporting documentation, and that the names of the contributors or copyright holders not be used in advertising or publicity pertaining to distribution of the software without specific prior permission. THE CONTRIBUTORS AND COPYRIGHT HOLDERS OF THIS SOFTWARE DISCLAIM ALL WARRANTIES WITH REGARD TO THIS SOFTWARE, INCLUDING ALL IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS, IN NO EVENT SHALL THE CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY SPECIAL, INDIRECT OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.