changeset 1:2afc5219c053 draft

Uploaded
author bgruening
date Sun, 24 Mar 2013 15:02:47 -0400
parents 48de449956c1
children 20ccfae924e2
files trim_galore_wrapper.xml
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/trim_galore_wrapper.xml	Tue Nov 13 14:42:24 2012 -0500
+++ b/trim_galore_wrapper.xml	Sun Mar 24 15:02:47 2013 -0400
@@ -49,8 +49,8 @@
 
         #if $rrbs.settingsType == "custom":
 
-            $rrbs
-            $non_directional
+            $rrbs.rrbs
+            $rrbs.non_directional
 
         #end if
 
@@ -204,11 +204,11 @@
                 </conditional>  <!-- retain_unpaired -->
 
             </when>  <!-- full -->
-      </conditional>  <!-- params -->
+        </conditional>  <!-- params -->
 
         <conditional name="rrbs">
             <param name="settingsType" type="select" label="RRBS specific settings">
-              <option value="default">Use Defaults</option>
+              <option value="default">Use Defaults (no RRBS)</option>
               <option value="custom">Full parameter list</option>
             </param>
             <when value="default" />