Mercurial > repos > bgruening > tool_dependency_definition_test
changeset 0:fc0bea2d46f5
Uploaded
| author | bgruening |
|---|---|
| date | Mon, 22 Jul 2013 09:45:32 -0400 |
| parents | |
| children | 542224fd6963 |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 56 insertions(+), 0 deletions(-) [+] |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Mon Jul 22 09:45:32 2013 -0400 @@ -0,0 +1,56 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="lapack" version="3.4.2"> + <repository changeset_revision="a6b8f46acca7" name="package_lapack_3_4" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + </package> + <package name="atlas" version="3.10.1"> + <repository changeset_revision="68df9078bf69" name="package_atlas_3_10" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + </package> + <package name="numpy" version="1.7.1"> + <repository changeset_revision="ad6ebe2c75ef" name="package_numpy_1_7" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + </package> + <package name="scipy" version="0.12.0"> + <install version="1.0"> + <actions> + <action type="download_by_url">http://downloads.sourceforge.net/project/scipy/scipy/0.12.0/scipy-0.12.0.tar.gz</action> + <action type="set_environment_for_install"> + <repository changeset_revision="68df9078bf69" name="package_atlas_3_10" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu"> + <package name="atlas" version="3.10.1" /> + </repository> + <repository changeset_revision="a6b8f46acca7" name="package_lapack_3_4" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu"> + <package name="lapack" version="3.4.2" /> + </repository> + <repository changeset_revision="ad6ebe2c75ef" name="package_numpy_1_7" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu"> + <package name="numpy" version="1.7.1" /> + </repository> + </action> + <action type="make_directory">$INSTALL_DIR/lib/python</action> + <action language="cheetah" type="template_command"> + export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && + + #if env.get('ATLAS_LIB_DIR', False): + export ATLAS=$ATLAS_LIB_DIR/libatlas.a && + #end if + #if env.get('LAPACK_LIB_DIR', False): + export BLAS=$LAPACK_LIB_DIR/libblas.a && + export LAPACK=$LAPACK_LIB_DIR/liblapack.a && + #end if + + export PATH=$PATH:$PATH_NUMPY && + export PYTHONPATH=$PYTHONPATH:$PYTHONPATH_NUMPY && + python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin + </action> + + <action type="set_environment"> + <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> + <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> + <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable> + <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable> + <environment_variable action="set_to" name="PYTHONPATH_SCIPY">$INSTALL_DIR/lib/python</environment_variable> + <environment_variable action="set_to" name="PATH_SCIPY">$INSTALL_DIR/bin</environment_variable> + </action> + </actions> + </install> + <readme>Compiling scipy requires a C and Fortran compiler (typically gcc and gfortran). The PYTHONPATH for scipy can be accessed through PYTHONPATH_SCIPY and the binaries with PATH_SCIPY.</readme> + </package> +</tool_dependency>