Mercurial > repos > bgruening > test_repository_setup_python_environment
comparison tool_dependencies.xml @ 1:52962b810ccc draft
Uploaded
| author | bgruening |
|---|---|
| date | Sun, 29 Jun 2014 07:46:30 -0400 |
| parents | ee884828d257 |
| children | f15a6321aeba |
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| 0:ee884828d257 | 1:52962b810ccc |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="python" version="2.7"> | 3 <package name="python" version="2.7"> |
| 4 <repository changeset_revision="d031f8824405" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | 4 <repository changeset_revision="c3b5cd4e5ce4" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> |
| 5 </package> | 5 </package> |
| 6 <package name="pysam" version="0.7.7"> | 6 <package name="pysam" version="0.7.7"> |
| 7 <install version="1.0"> | 7 <install version="1.0"> |
| 8 <actions> | 8 <actions> |
| 9 <action type="setup_python_environment"> | 9 <action type="setup_python_environment"> |
| 10 <repository changeset_revision="d031f8824405" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> | 10 <repository changeset_revision="c3b5cd4e5ce4" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> |
| 11 <package name="python" version="2.7" /> | 11 <package name="python" version="2.7" /> |
| 12 </repository> | 12 </repository> |
| 13 <!-- allow downloading and installing an Python package from https://pypi.org/ --> | 13 <!-- allow downloading and installing an Python package from https://pypi.org/ --> |
| 14 <package>pysam=0.7.6</package> | |
| 15 <package>pysam</package> | |
| 16 <package>https://pypi.python.org/packages/source/d/deepTools/deepTools-1.5.8.tar.gz</package> | 14 <package>https://pypi.python.org/packages/source/d/deepTools/deepTools-1.5.8.tar.gz</package> |
| 17 </action> | 15 </action> |
| 18 | 16 |
| 19 <action type="set_environment"> | 17 <action type="set_environment"> |
| 20 <environment_variable action="set_to" name="TEST_ENV_VAR">$INSTALL_DIR</environment_variable> | 18 <environment_variable action="set_to" name="TEST_ENV_VAR">$INSTALL_DIR</environment_variable> |