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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="python" version="2.7">
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3
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4 <repository changeset_revision="16add262be4e" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="pysam" version="0.7.7">
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7 <install version="1.0">
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8 <actions>
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9 <action type="setup_python_environment">
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3
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10 <repository changeset_revision="16add262be4e" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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11 <package name="python" version="2.7" />
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12 </repository>
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13 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
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14 <package>https://pypi.python.org/packages/source/d/deepTools/deepTools-1.5.8.tar.gz</package>
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2
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15 <package>kMer-0.2.0.tar.gz</package>
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3
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16 <package>https://pypi.python.org/packages/source/k/khmer/khmer-1.0.tar.gz</package>
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17 <!--package>https://pypi.python.org/packages/source/k/khmer/khmer-1.0.tar.gz#md5=b60639a8b2939836f66495b9a88df757</package-->
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18
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19 </action>
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20
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21 <action type="set_environment">
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22 <environment_variable action="set_to" name="TEST_ENV_VAR">$INSTALL_DIR</environment_variable>
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23 </action>
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24
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25 </actions>
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26 </install>
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27 <readme>
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28 Test repository for easy installation of R packages.
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29 </readme>
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30 </package>
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31 </tool_dependency>
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