Mercurial > repos > bgruening > sailfish
changeset 2:7e250f77d71d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/sailfish commit 8c5c19a86870a02d3d0561958bac2ba71c64bf5f-dirty
| author | bgruening |
|---|---|
| date | Fri, 16 Oct 2015 15:02:23 -0400 |
| parents | 8792dd3c72b6 |
| children | f261bfea2976 |
| files | tool-data/sailfish_indexes.loc.sample tool_data_table_conf.xml.sample |
| diffstat | 2 files changed, 20 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/sailfish_indexes.loc.sample Fri Oct 16 15:02:23 2015 -0400 @@ -0,0 +1,14 @@ +# This is a sample file distributed with Galaxy that is used to define a +# list of sailfish indices, using three columns tab separated: +# +# sailfish_index_id{tab}Sailfish Index desciption{tab}/data/sailfish_indexes/sailfish_index_id/ +# +# An index can be created with the following command: +# +# sailfish index +# --transcripts your_transcripts.fasta +# --kmerSize 21 +# --out /data/sailfish_indexes/sailfish_index_id/ +# --threads 4 +# +
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_data_table_conf.xml.sample Fri Oct 16 15:02:23 2015 -0400 @@ -0,0 +1,6 @@ +<tables> + <table name="sailfish_indexes" comment_char="#"> + <columns>value, name, path</columns> + <file path="tool-data/sailfish_indexes.loc" /> + </table> +</tables>