Mercurial > repos > bgruening > pileometh

annotate tool_dependencies.xml @ 12:9f6bbbde363c draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 2953c88908606f4f22b3987bc4ba29bdb4c30479
author bgruening
date Sun, 12 Mar 2017 06:15:44 -0400 (2017-03-12)
parents 68cd9006e91c
children f9055d7c7f5c
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c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
bgruening
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1 <?xml version="1.0"?>
c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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2 <tool_dependency>
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68cd9006e91c planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 5468fb89708be679e4e580074734e671f60a9648
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3 <package name="methyldackel" version="0.2.1">
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c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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4 <install version="1.0">
c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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5 <actions>
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68cd9006e91c planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 5468fb89708be679e4e580074734e671f60a9648
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6 <action target_filename="MethylDackel-0.2.1.tar.gz" type="download_by_url">https://github.com/dpryan79/MethylDackel/archive/0.2.1.tar.gz</action>
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c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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7 <action type="shell_command">make</action>
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9f6bbbde363c planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 2953c88908606f4f22b3987bc4ba29bdb4c30479
bgruening
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8 <action type="shell_command">make install prefix=$INSTALL_DIR/bin/</action>
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c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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9 <action type="set_environment">
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9f6bbbde363c planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 2953c88908606f4f22b3987bc4ba29bdb4c30479
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10 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin/</environment_variable>
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68cd9006e91c planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 5468fb89708be679e4e580074734e671f60a9648
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11 <environment_variable name="METHYLDACKEL_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
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c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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12 </action>
c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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13 </actions>
c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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14 </install>
c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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15 <readme>
c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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16 <![CDATA[
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68cd9006e91c planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 5468fb89708be679e4e580074734e671f60a9648
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17 MethylDackel: A tool for processing bisulfite sequencing alignments.
68cd9006e91c planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 5468fb89708be679e4e580074734e671f60a9648
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18 See https://github.com/dpryan79/MethylDackel/
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c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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19 ]]>
c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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20 </readme>
c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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21 </package>
c88df21da662 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/pileometh commit 7d50a5c7393176dcf1d25e5cc2f22544b1f6712c-dirty
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22 </tool_dependency>