Mercurial > repos > bgruening > peptideshaker

changeset 41:86ab83258d40 draft

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Fix datatypes for searchgui input and output
author iracooke
date Wed, 06 May 2015 03:34:28 -0400
parents d5e9a31de022
children db94678bef46
files peptide_shaker.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/peptide_shaker.xml	Wed May 06 03:30:37 2015 -0400
+++ b/peptide_shaker.xml	Wed May 06 03:34:28 2015 -0400
@@ -161,7 +161,7 @@
 ]]>
     </command>
     <inputs>
-        <param name="searchgui_input" format="searchgui_archive" type="data" label="Compressed SearchGUI results"
+        <param name="searchgui_input" format="searchgui_zip" type="data" label="Compressed SearchGUI results"
             help="SearchGUI Results from History"/>
 
         <conditional name="species_type">
@@ -545,7 +545,7 @@
     </outputs>
     <tests>
         <test>
-            <param name="searchgui_input" value="tiny_searchgui_result1.zip" ftype="searchgui_archive"/>
+            <param name="searchgui_input" value="tiny_searchgui_result1.zip" ftype="searchgui_zip"/>
             <param name="species_type_selector" value="no_species_type"/>
             <param name="processing_options_selector" value="no"/>
             <param name="filtering_options_selector" value="no"/>
@@ -571,7 +571,7 @@
             <output name="output_proteins_phosphorylation" file="peptide_shaker_proteins_phoshorylation_result2.tabular" ftype="tabular" />
         </test>
         <test>
-            <param name="searchgui_input" value="tiny_searchgui_result1.zip" ftype="searchgui_archive"/>
+            <param name="searchgui_input" value="tiny_searchgui_result1.zip" ftype="searchgui_zip"/>
             <param name="species_type_selector" value="Vertebrates"/>
             <param name="species" value="Human (Homo sapiens)"/>
             <param name="processing_options_selector" value="no"/>