Mercurial > repos > bgruening > package_openbabel_2_3

annotate tool_dependencies.xml @ 1:6fd6b904eeff

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author bgruening
date Thu, 25 Apr 2013 11:02:31 -0400
parents 9e07452137da
children 13d2ea9436b3
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1 <tool_dependency>
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2 <package name="openbabel" version="2.3.2">
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3 <install version="1.0">
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4 <actions>
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5 <action type="download_by_url">http://downloads.sourceforge.net/project/openbabel/openbabel/2.3.2/openbabel-2.3.2.tar.gz</action>
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6 <!--
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7 Huge hack, to point to the actual python lib path. Cmake gets confused with mixed python versions (2.x and 3.x) and we need to point explicitely to the recent version.
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8 -->
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9 <action type="shell_command">cmake . -DPYTHON_BINDINGS=ON -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR -DPYTHON_LIBRARY=`python -c 'import sys; print "%s/lib/python%s.%s/config/libpython%s.%s.so" % (sys.exec_prefix, sys.version_info.major, sys.version_info.minor, sys.version_info.major, sys.version_info.minor)'`</action>
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10 <action type="shell_command">make</action>
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11 <action type="shell_command">make install</action>
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12 <action type="set_environment">
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13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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14 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/</environment_variable>
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15 <!-- internal variables for open babel -->
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16 <environment_variable name="BABEL_DATADIR" action="set_to">$INSTALL_DIR/share/openbabel</environment_variable>
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17 <environment_variable name="BABEL_LIBDIR" action="set_to">$INSTALL_DIR/lib/openbabel/2.3.2</environment_variable>
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18 <!-- galaxy variables for other tool wrappers -->
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19 <environment_variable name="OPENBABEL_LIB_DIR" action="set_to">$INSTALL_DIR/lib/</environment_variable>
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20 <environment_variable name="OPENBABEL_INCLUDE_DIR" action="set_to">$INSTALL_DIR/include/</environment_variable>
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21 </action>
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22 </actions>
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23 </install>
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24 <readme>Compiling OpenBabel requires g++ and CMake 2.4+. Optional but required for a few features is Eigen version 2 or newer and the cairo development libraries. OPENBABEL_INCLUDE_DIR and OPENBABEL_LIB_DIR can be accessed from other tool wrappers.</readme>
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25 </package>
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26 </tool_dependency>