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1 <?xml version='1.0' encoding='UTF-8'?>
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2 <tool id="QCShrinker" name="QCShrinker" version="1.12.0">
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3 <description>This application is used to remove the verbose table attachments from a qcml file that are not needed anymore, e.g. for a final report.</description>
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4 <macros>
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5 <token name="@EXECUTABLE@">QCShrinker</token>
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6 <import>macros.xml</import>
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7 </macros>
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8 <expand macro="stdio"/>
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9 <expand macro="requirements"/>
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10 <command>QCShrinker
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11
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12 -in ${param_in}
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13 -qp_accessions ${param_qp_accessions}
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14 -name ${param_name}
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15 -run ${param_run}
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16 -out ${param_out}
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17 -threads \${GALAXY_SLOTS:-24}
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18 </command>
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19 <inputs>
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20 <param name="param_in" type="data" format="" optional="False" label="Input qcml file" help="(-in)"/>
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21 <param name="param_qp_accessions" type="text" size="20" label="A list of cv accessions that should be removed. If empty, the usual suspects will be removed!" help="(-qp_accessions)"/>
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22 <param name="param_name" type="text" size="20" label="The name of the target run or set that contains the requested quality parameter." help="(-name)"/>
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23 <param name="param_run" type="data" format="mzML" optional="True" label="The file from which the name of the target run that contains the requested quality parameter is taken. This overrides the name parameter!" help="(-run)"/>
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24 </inputs>
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25 <outputs>
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26 <data name="param_out" label="Output extended/reduced qcML file" format="data"/>
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27 </outputs>
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28 <help>**What it does**
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29
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30 This application is used to remove the verbose table attachments from a qcml file that are not needed anymore, e.g. for a final report.
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31
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32
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33 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_QCShrinker.html
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34
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35 @REFERENCES@
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36 </help>
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37 </tool>
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