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1 <?xml version='1.0' encoding='UTF-8'?>
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2 <tool id="FuzzyDiff" name="FuzzyDiff" version="1.12.0">
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3 <description>Compares two files, tolerating numeric differences.</description>
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4 <macros>
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5 <token name="@EXECUTABLE@">FuzzyDiff</token>
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6 <import>macros.xml</import>
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7 </macros>
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8 <expand macro="stdio"/>
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9 <expand macro="requirements"/>
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10 <command>FuzzyDiff
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11
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12 -in1 ${param_in1}
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13 -in2 ${param_in2}
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14 -ratio ${param_ratio}
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15 -absdiff ${param_absdiff}
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16 -verbose ${param_verbose}
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17 -tab_width ${param_tab_width}
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18 -first_column ${param_first_column}
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19 -threads \${GALAXY_SLOTS:-24}
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20 #if $adv_opts.adv_opts_selector=='advanced':
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21 -whitelist ${adv_opts.param_whitelist}
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22 #end if
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23 </command>
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24 <inputs>
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25 <param name="param_in1" type="data" format="data" label="first input file" help="(-in1)"/>
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26 <param name="param_in2" type="data" format="data" label="second input file" help="(-in2)"/>
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27 <param name="param_ratio" type="float" min="1.0" optional="True" value="1.0" label="acceptable relative error. Only one of 'ratio' or 'absdiff' has to be satisfied. Use "absdiff" to deal with cases like "zero vs. epsilon"." help="(-ratio)"/>
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28 <param name="param_absdiff" type="float" min="0.0" optional="True" value="0.0" label="acceptable absolute difference. Only one of 'ratio' or 'absdiff' has to be satisfied. " help="(-absdiff)"/>
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29 <param name="param_verbose" type="integer" min="0" max="3" optional="True" value="2" label="set verbose level:#br#0 = very quiet mode (absolutely no output)#br#1 = quiet mode (no output unless differences detected)#br#2 = default (include summary at end)#br#3 = continue after errors#br#" help="(-verbose)"/>
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30 <param name="param_tab_width" type="integer" min="1" optional="True" value="8" label="tabulator width, used for calculation of column numbers" help="(-tab_width)"/>
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31 <param name="param_first_column" type="integer" min="0" optional="True" value="1" label="number of first column, used for calculation of column numbers" help="(-first_column)"/>
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32 <expand macro="advanced_options">
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33 <param name="param_whitelist" type="text" size="20" value="<?xml-stylesheet" label="Lines containing one of these strings are skipped" help="(-whitelist)"/>
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34 </expand>
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35 </inputs>
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36 <outputs/>
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37 <help>**What it does**
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38
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39 Compares two files, tolerating numeric differences.
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40
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41
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42 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_FuzzyDiff.html
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43
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44 @REFERENCES@
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45 </help>
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46 </tool>
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