Mercurial > repos > bgruening > hicexplorer_hicbuildmatrix

annotate test-data/hicValidateLocations/overlap_smc3_statistics @ 14:d5c7bf85dd93 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 9e4e8de0e003fc15f5bae3648232c2a8a57e6391"
author iuc
date Mon, 09 Dec 2019 10:27:01 +0000
parents
children c8f355e10161
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14
d5c7bf85dd93 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 9e4e8de0e003fc15f5bae3648232c2a8a57e6391"
iuc
parents:
diff changeset
1 # HiCExplorer hicValidateLocations 3.3
d5c7bf85dd93 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 9e4e8de0e003fc15f5bae3648232c2a8a57e6391"
iuc
parents:
diff changeset
2 # Overlap of loop file /tmp/tmpo82hqd2o/files/4/a/4/dataset_4a45db46-19b9-4b40-9d5b-d049a100e2aa.dat with protein file /tmp/tmpo82hqd2o/files/3/5/8/dataset_358b0ce7-ab08-46fc-8968-195d416429ca.dat
d5c7bf85dd93 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 9e4e8de0e003fc15f5bae3648232c2a8a57e6391"
iuc
parents:
diff changeset
3 #
d5c7bf85dd93 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 9e4e8de0e003fc15f5bae3648232c2a8a57e6391"
iuc
parents:
diff changeset
4 Protein peaks: 3097
d5c7bf85dd93 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 9e4e8de0e003fc15f5bae3648232c2a8a57e6391"
iuc
parents:
diff changeset
5 Matched Loops: 530
d5c7bf85dd93 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 9e4e8de0e003fc15f5bae3648232c2a8a57e6391"
iuc
parents:
diff changeset
6 Total Loops: 1007
d5c7bf85dd93 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 9e4e8de0e003fc15f5bae3648232c2a8a57e6391"
iuc
parents:
diff changeset
7 Loops match protein: 0.5263157894736842