Mercurial > repos > bgruening > hicexplorer_chicviewpoint

annotate test-data/hicDifferentialTAD/accepted.txt @ 7:ec40077337e3 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 8586409c5f329eaf75902eedc3d29a6e82560788
author iuc
date Mon, 01 Jul 2024 19:20:51 +0000
parents 7403e41df69e
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
7
ec40077337e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 8586409c5f329eaf75902eedc3d29a6e82560788
iuc
parents: 5
diff changeset
1 # Created with HiCExplorer's hicDifferentialTAD version 3.7.5
5
7403e41df69e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 2a0943e78bdc8ebb13f181399206a9eea37ed78f"
iuc
parents:
diff changeset
2 # H0 'regions are equal' H0 is accepted for all p-value greater the user given p-value threshold; i.e. regions in this file are not considered as differential.
7403e41df69e "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 2a0943e78bdc8ebb13f181399206a9eea37ed78f"
iuc
parents:
diff changeset
3 # Accepted regions with Wilcoxon rank-sum test to p-value: 1.0 with used mode: all and modeReject: one
7
ec40077337e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 8586409c5f329eaf75902eedc3d29a6e82560788
iuc
parents: 5
diff changeset
4 # Chromosome start end name score strand p-value left-inter-TAD p-value right-inter-TAD p-value intra-TAD W left-inter-TAD W right-inter-TAD W intra-TAD