Mercurial > repos > bgruening > glimmer_gene_calling_workflow
comparison glimmer3_with_trainingset.ga @ 4:fee0a7b3335e draft default tip
Uploaded
author | bgruening |
---|---|
date | Thu, 11 Jul 2013 02:37:22 -0400 |
parents | 4c03eeb47cbb |
children |
comparison
equal
deleted
inserted
replaced
3:4c03eeb47cbb | 4:fee0a7b3335e |
---|---|
71 "left": 503, | 71 "left": 503, |
72 "top": 486 | 72 "top": 486 |
73 }, | 73 }, |
74 "post_job_actions": {}, | 74 "post_job_actions": {}, |
75 "tool_errors": null, | 75 "tool_errors": null, |
76 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/bgruening/glimmer/glimmer_build-icm/0.2", | 76 "tool_id": "toolshed.g2.bx.psu.edu/repos/bgruening/glimmer/glimmer_build-icm/0.2", |
77 "tool_state": "{\"__page__\": 0, \"depth\": \"\\\"7\\\"\", \"period\": \"\\\"3\\\"\", \"width\": \"\\\"12\\\"\", \"stop_codon_opts\": \"{\\\"genbank_gencode\\\": \\\"11\\\", \\\"__current_case__\\\": 0, \\\"stop_codon_opts_selector\\\": \\\"gb\\\"}\", \"no_stops\": \"\\\"False\\\"\", \"chromInfo\": \"\\\"/home/bag/projects/galaxy/galaxy-dist/tool-data/shared/ucsc/chrom/?.len\\\"\", \"infile\": \"null\"}", | 77 "tool_state": "{\"__page__\": 0, \"depth\": \"\\\"7\\\"\", \"period\": \"\\\"3\\\"\", \"width\": \"\\\"12\\\"\", \"stop_codon_opts\": \"{\\\"genbank_gencode\\\": \\\"11\\\", \\\"__current_case__\\\": 0, \\\"stop_codon_opts_selector\\\": \\\"gb\\\"}\", \"no_stops\": \"\\\"False\\\"\", \"chromInfo\": \"\\\"/home/bag/projects/galaxy/galaxy-dist/tool-data/shared/ucsc/chrom/?.len\\\"\", \"infile\": \"null\"}", |
78 "tool_version": "0.2", | 78 "tool_version": "0.2", |
79 "type": "tool", | 79 "type": "tool", |
80 "user_outputs": [] | 80 "user_outputs": [] |
81 }, | 81 }, |
112 "left": 674, | 112 "left": 674, |
113 "top": 319 | 113 "top": 319 |
114 }, | 114 }, |
115 "post_job_actions": {}, | 115 "post_job_actions": {}, |
116 "tool_errors": null, | 116 "tool_errors": null, |
117 "tool_id": "testtoolshed.g2.bx.psu.edu/repos/bgruening/glimmer/glimmer_knowlegde-based/0.2", | 117 "tool_id": "toolshed.g2.bx.psu.edu/repos/bgruening/glimmer/glimmer_knowlegde-based/0.2", |
118 "tool_state": "{\"extend\": \"\\\"False\\\"\", \"__page__\": 0, \"linear\": \"\\\"True\\\"\", \"detailed_report\": \"\\\"False\\\"\", \"seq_input\": \"null\", \"gc_percent\": \"\\\"0.0\\\"\", \"start_codons\": \"\\\"atg,gtg,ttg\\\"\", \"threshold\": \"\\\"30\\\"\", \"stop_codon_opts\": \"{\\\"genbank_gencode\\\": \\\"11\\\", \\\"__current_case__\\\": 0, \\\"stop_codon_opts_selector\\\": \\\"gb\\\"}\", \"max_olap\": \"\\\"50\\\"\", \"no_indep\": \"\\\"False\\\"\", \"gene_len\": \"\\\"90\\\"\", \"report\": \"\\\"False\\\"\", \"chromInfo\": \"\\\"/home/bag/projects/galaxy/galaxy-dist/tool-data/shared/ucsc/chrom/?.len\\\"\", \"icm_input\": \"null\"}", | 118 "tool_state": "{\"extend\": \"\\\"False\\\"\", \"__page__\": 0, \"linear\": \"\\\"True\\\"\", \"detailed_report\": \"\\\"False\\\"\", \"seq_input\": \"null\", \"gc_percent\": \"\\\"0.0\\\"\", \"start_codons\": \"\\\"atg,gtg,ttg\\\"\", \"threshold\": \"\\\"30\\\"\", \"stop_codon_opts\": \"{\\\"genbank_gencode\\\": \\\"11\\\", \\\"__current_case__\\\": 0, \\\"stop_codon_opts_selector\\\": \\\"gb\\\"}\", \"max_olap\": \"\\\"50\\\"\", \"no_indep\": \"\\\"False\\\"\", \"gene_len\": \"\\\"90\\\"\", \"report\": \"\\\"False\\\"\", \"chromInfo\": \"\\\"/home/bag/projects/galaxy/galaxy-dist/tool-data/shared/ucsc/chrom/?.len\\\"\", \"icm_input\": \"null\"}", |
119 "tool_version": "0.2", | 119 "tool_version": "0.2", |
120 "type": "tool", | 120 "type": "tool", |
121 "user_outputs": [] | 121 "user_outputs": [] |
122 }, | 122 }, |