diff test-data/short_summary.specific.mammalia_odb10.pre.asm2.txt @ 0:6af76d4371f8 draft

planemo upload for repository https://github.com/ERGA-consortium/EARs/tree/main commit a08f73e00550020ac83f4d45045075962a8a2251
author bgruening
date Thu, 04 Jul 2024 12:43:34 +0000
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+# BUSCO version is: 5.4.7 
+# The lineage dataset is: mammalia_odb10 (Creation date: 2021-02-19, number of genomes: 24, number of BUSCOs: 9226)
+# Summarized benchmarking in BUSCO notation for file /scratch/ddepanis/Elephant_project/mEleMax1.2/curated/1_evaluation/ele_pre/ASSEMBLY_FASTAS/ele_pre.asm2.fasta
+# BUSCO was run in mode: euk_genome_met
+# Gene predictor used: metaeuk
+
+	***** Results: *****
+
+	C:93.7%[S:92.9%,D:0.8%],F:1.1%,M:5.2%,n:9226	   
+	8641	Complete BUSCOs (C)			   
+	8570	Complete and single-copy BUSCOs (S)	   
+	71	Complete and duplicated BUSCOs (D)	   
+	105	Fragmented BUSCOs (F)			   
+	480	Missing BUSCOs (M)			   
+	9226	Total BUSCO groups searched		   
+
+Assembly Statistics:
+	555	Number of scaffolds
+	632	Number of contigs
+	3238925270	Total length
+	0.108%	Percent gaps
+	116 MB	Scaffold N50
+	88 MB	Contigs N50
+
+
+Dependencies and versions:
+	hmmsearch: 3.1
+	bbtools: 39.01
+	metaeuk: 6.a5d39d9
+	busco: 5.4.7