Mercurial > repos > bgruening > eden_rna_cross_validation_workflow

This package is a Galaxy workflow for RNA sequence cross validation.

It uses the EDeN suite to train and test on a known set of
RNA sequences. The negative set of RNA sequences is shuffled
on the input dataset maintaining composition with shuffleseq (EMBOSS).

See http://www.galaxyproject.org for information about the Galaxy Project.


Sample Data
===========


Citation
========


Availability
============

This workflow is available on the main Galaxy Tool Shed:

http://toolshed.g2.bx.psu.edu/view/bgruening/eden_rna_cross_validation_workflow

Development is being done on github:

https://github.com/bgruening/galaxytools/workflows/EDeN/


Dependencies
============

These dependencies should be resolved automatically via the Galaxy Tool Shed:

* http://toolshed.g2.bx.psu.edu/view/bgruening/glimmer3
* http://toolshed.g2.bx.psu.edu/view/devteam/emboss_5
author	bgruening
date	Thu, 15 May 2014 12:17:52 -0400
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