Mercurial > repos > bgruening > eden_rna_cross_validation_workflow
diff readme.rst @ 0:dd85dc28075f draft
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author | bgruening |
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date | Thu, 15 May 2014 12:17:52 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/readme.rst Thu May 15 12:17:52 2014 -0400 @@ -0,0 +1,38 @@ +This package is a Galaxy workflow for RNA sequence cross validation. + +It uses the EDeN suite to train and test on a known set of +RNA sequences. The negative set of RNA sequences is shuffled +on the input dataset maintaining composition with shuffleseq (EMBOSS). + +See http://www.galaxyproject.org for information about the Galaxy Project. + + +Sample Data +=========== + + + +Citation +======== + + + +Availability +============ + +This workflow is available on the main Galaxy Tool Shed: + +http://toolshed.g2.bx.psu.edu/view/bgruening/eden_rna_cross_validation_workflow + +Development is being done on github: + +https://github.com/bgruening/galaxytools/workflows/EDeN/ + + +Dependencies +============ + +These dependencies should be resolved automatically via the Galaxy Tool Shed: + +* http://toolshed.g2.bx.psu.edu/view/bgruening/glimmer3 +* http://toolshed.g2.bx.psu.edu/view/devteam/emboss_5