Mercurial > repos > bgruening > diffbind
comparison tool_dependencies.xml @ 5:0c322f7afd31 draft
Uploaded
| author | bgruening |
|---|---|
| date | Tue, 14 Jan 2014 03:32:06 -0500 |
| parents | 0753d019a353 |
| children | 7929c8b3f6f9 |
comparison
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| 4:aad86ce28779 | 5:0c322f7afd31 |
|---|---|
| 5 </package> | 5 </package> |
| 6 <package name="deseq2" version="1.0.17"> | 6 <package name="deseq2" version="1.0.17"> |
| 7 <repository changeset_revision="3b6a8c377895" name="package_deseq2_1_0_17" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" /> | 7 <repository changeset_revision="3b6a8c377895" name="package_deseq2_1_0_17" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" /> |
| 8 </package> | 8 </package> |
| 9 | 9 |
| 10 <package name="diffbind" version="2.13"> | 10 <package name="diffbind" version="1.8.3"> |
| 11 <install version="1.0"> | 11 <install version="1.0"> |
| 12 <actions> | 12 <actions> |
| 13 <action type="setup_r_environment"> | 13 <action type="setup_r_environment"> |
| 14 | |
| 15 <repository changeset_revision="0a395bcd7efd" name="package_r_3_0_1" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu"> | 14 <repository changeset_revision="0a395bcd7efd" name="package_r_3_0_1" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu"> |
| 16 <package name="R_3_0_1" version="3.0.1" /> | 15 <package name="R_3_0_1" version="3.0.1" /> |
| 17 </repository> | 16 </repository> |
| 18 | |
| 19 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/BiocGenerics_0.8.0.tar.gz</package> | 17 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/BiocGenerics_0.8.0.tar.gz</package> |
| 20 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/XVector_0.2.0.tar.gz</package> | 18 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/XVector_0.2.0.tar.gz</package> |
| 21 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/limma_3.18.9.tar.gz</package> | 19 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/limma_3.18.9.tar.gz</package> |
| 22 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/gtools_3.1.1.tar.gz</package> | 20 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/gtools_3.1.1.tar.gz</package> |
| 23 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/gdata_2.13.2.tar.gz</package> | 21 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/gdata_2.13.2.tar.gz</package> |
| 35 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/DiffBind_1.8.3.tar.gz</package> | 33 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/DiffBind_1.8.3.tar.gz</package> |
| 36 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/XML_3.98-1.1.tar.gz</package> | 34 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/XML_3.98-1.1.tar.gz</package> |
| 37 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/BSgenome_1.30.0.tar.gz</package> | 35 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/BSgenome_1.30.0.tar.gz</package> |
| 38 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/RCurl_1.95-4.1.tar.gz</package> | 36 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/RCurl_1.95-4.1.tar.gz</package> |
| 39 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/rtracklayer_1.22.0.tar.gz</package> | 37 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/rtracklayer_1.22.0.tar.gz</package> |
| 40 | 38 <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/getopt_1.20.0.tar.gz</package> |
| 41 </action> | 39 </action> |
| 42 </actions> | 40 </actions> |
| 43 </install> | 41 </install> |
| 44 <readme> | 42 <readme> |
| 45 Differential Binding Analysis of ChIP-Seq peak data | 43 Differential Binding Analysis of ChIP-Seq peak data |