Mercurial > repos > bgruening > deeptools

diff bamCorrelate.xml @ 37:2f7edf06a5da draft

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author bgruening
date Sat, 01 Feb 2014 06:04:58 -0500
parents 934b9fccabd4
children c5787c91cab8
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line diff
--- a/bamCorrelate.xml	Fri Jan 31 05:12:41 2014 -0500
+++ b/bamCorrelate.xml	Sat Feb 01 06:04:58 2014 -0500
@@ -150,18 +150,19 @@
    :alt: Heatmap of RNA Polymerase II ChIP-seq
 
 
+You can find more details in the `bamCorrelate wiki`_.
+
+.. _bamCorrelate wiki: https://github.com/fidelram/deepTools/wiki/Normalizations#wiki-bamCompare
+
+
 **Output files**:
 
 - diagnostic plot produced by bamCorrelate is a clustered heatmap displaying the values for each pair-wise correlation, see below for an example
 - data matrix (optional) in case you want to plot the correlation values using a different program, e.g. R, this matrix can be used
 
 
-
-
 -----
 
-.. class:: infomark
-
 @REFERENCES@
 
     </help>