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changeset 5:518f601f47d8 draft default tip

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools commit 7d7a519c3a2cc612d38695b335d0f6c75a099de3"
author bgruening
date Fri, 26 Feb 2021 13:50:41 +0000
parents 118ca5beb81f
children
files color_to_gray.py starting_modules.py starting_modules.xml starting_modules_nameandtypes.xml test-data/color_to_gray.cppipe test-data/color_to_gray_combine_channels.cppipe test-data/color_to_gray_split_channels.cppipe test-data/color_to_gray_split_hsv.cppipe test-data/color_to_gray_split_rgb.cppipe test-data/common-complicated.cppipe test-data/common-nogroup.cppipe test-data/common.cppipe test-data/common_image_math.cppipe test-data/convert_objects_to_image.cppipe test-data/display_data_on_image.cppipe test-data/enhance_or_suppress_features.cppipe test-data/export_to_spreadsheet.cppipe test-data/export_to_spreadsheet_create_gene_image_filename.cppipe test-data/export_to_spreadsheet_create_gene_metadata.cppipe test-data/export_to_spreadsheet_multi.cppipe test-data/gray_to_color.cppipe test-data/identify_primary_objects.cppipe test-data/identify_primary_objects_adv_adaptive_otsu.cppipe test-data/identify_primary_objects_adv_global_manual.cppipe test-data/identify_primary_objects_adv_global_mce.cppipe test-data/identify_primary_objects_adv_global_measurement.cppipe test-data/identify_primary_objects_adv_global_rb.cppipe test-data/identify_primary_objects_noadv.cppipe test-data/image_math_1.cppipe test-data/image_math_2.cppipe test-data/image_math_3.cppipe test-data/mask_image.cppipe test-data/measure_granularity.cppipe test-data/measure_image_area_occupied.cppipe test-data/measure_image_intensity.cppipe test-data/measure_image_quality.cppipe test-data/measure_object_intensity.cppipe test-data/measure_object_size_shape.cppipe test-data/measure_texture.cppipe test-data/overlay_outlines.cppipe test-data/overlay_outlines_blank_color.cppipe test-data/overlay_outlines_blank_grayscale.cppipe test-data/overlay_outlines_non_blank_color.cppipe test-data/overlay_outlines_non_blank_grayscale.cppipe test-data/relate_objects.cppipe test-data/save_images.cppipe test-data/tile.cppipe test-data/tile_across_cycles.cppipe test-data/tile_across_cyles.cppipe test-data/track_object.cppipe test-data/track_object_distance_no_filter_min.cppipe test-data/track_object_follow_neighbors.cppipe test-data/track_object_lap_velocity.cppipe test-data/track_object_measurement_intensity.cppipe test-data/track_object_overlap_no_filter_max.cppipe tile.py track_objects.py
diffstat 57 files changed, 123 insertions(+), 139 deletions(-) [+]
line wrap: on
line diff
--- a/color_to_gray.py	Sat Feb 06 09:43:49 2021 +0000
+++ b/color_to_gray.py	Fri Feb 26 13:50:41 2021 +0000
@@ -127,7 +127,7 @@
              "Relative weight of the channel:1.0\n",
              "Image name:Channel1\n"
              ])
-
+    result = result.rstrip("\n")
     return result
 
 
--- a/starting_modules.py	Sat Feb 06 09:43:49 2021 +0000
+++ b/starting_modules.py	Fri Feb 26 13:50:41 2021 +0000
@@ -11,7 +11,7 @@
 def write_images():
     filter_images = params['images']['filter_images']
 
-    _str = "\nImages:[module_num:1|svn_version:\\'Unknown\\'|variable_revision_number:2|show_window:False|notes:\\x5B\\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]\n"
+    _str = "\nImages:[module_num:1|svn_version:\\'Unknown\\'|variable_revision_number:2|show_window:False|notes:\\x5B\\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\\'\\x5D|batch_state:array(\\x5B\\x5D, dtype=uint8)|enabled:True|wants_pause:False]\n"
     _str += FOURSPACES + ":\n"
     _str += FOURSPACES + "Filter images?:%s\n" % filter_images
     _str += FOURSPACES + "Select the rule criteria:and (extension does isimage) (directory doesnot startwith \".\")\n"
@@ -28,7 +28,7 @@
     else:
         method_count = 1
 
-    _str = "\nMetadata:[module_num:2|svn_version:\\'Unknown\\'|variable_revision_number:4|show_window:False|notes:\\x5B\\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]\n"
+    _str = "\nMetadata:[module_num:2|svn_version:\\'Unknown\\'|variable_revision_number:4|show_window:False|notes:\\x5B\\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\\'\\x5D|batch_state:array(\\x5B\\x5D, dtype=uint8)|enabled:True|wants_pause:False]\n"
     _str += FOURSPACES + "Extract metadata?:%s\n" % extract
 
     if extract == "No":
--- a/starting_modules.xml	Sat Feb 06 09:43:49 2021 +0000
+++ b/starting_modules.xml	Fri Feb 26 13:50:41 2021 +0000
@@ -1,7 +1,8 @@
-<tool id="cp_common" name="Starting Modules" version="@CP_VERSION@">
+<tool id="cp_common" name="Starting Modules" version="@CP_VERSION@+galaxy@VERSION_SUFFIX@">
     <description>load images and metadata into CellProfiler (Images, Metadata, NamesAndTypes, Groups)</description>
     <macros>
         <import>macros.xml</import>
+        <token name="@VERSION_SUFFIX@">1</token>
         <import>starting_modules_images.xml</import>
         <import>starting_modules_metadata.xml</import>
         <import>starting_modules_nameandtypes.xml</import>
--- a/starting_modules_nameandtypes.xml	Sat Feb 06 09:43:49 2021 +0000
+++ b/starting_modules_nameandtypes.xml	Fri Feb 26 13:50:41 2021 +0000
@@ -25,7 +25,7 @@
         </param>
         <param name="contain" type="select">
             <option value="contain">Contain</option>
-            <option value="Contain regular expression">Contain regular expression</option>
+            <option value="containregexp">Contain regular expression</option>
             <option value="startwith">Start with</option>
             <option value="endwith">End with</option>
             <option value="Exactly match">Exactly match</option>
--- a/test-data/color_to_gray.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/color_to_gray.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -76,4 +76,3 @@
     Channel number:Red\x3A 1
     Relative weight of the channel:1.0
     Image name:Channel1
-
--- a/test-data/color_to_gray_combine_channels.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/color_to_gray_combine_channels.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -79,4 +79,3 @@
     Channel number:3
     Relative weight of the channel:0.5
     Image name:Channel1
-
--- a/test-data/color_to_gray_split_channels.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/color_to_gray_split_channels.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -79,4 +79,3 @@
     Channel number:3
     Relative weight of the channel:1.0
     Image name:Image3
-
--- a/test-data/color_to_gray_split_hsv.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/color_to_gray_split_hsv.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -76,4 +76,3 @@
     Channel number:Red\x3A 1
     Relative weight of the channel:1.0
     Image name:Channel1
-
--- a/test-data/color_to_gray_split_rgb.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/color_to_gray_split_rgb.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -76,4 +76,3 @@
     Channel number:Red\x3A 1
     Relative weight of the channel:1.0
     Image name:Channel1
-
--- a/test-data/common-complicated.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/common-complicated.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:4
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/common-nogroup.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/common-nogroup.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:4
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/common.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/common.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:4
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/common_image_math.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/common_image_math.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:6
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/convert_objects_to_image.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/convert_objects_to_image.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/display_data_on_image.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/display_data_on_image.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/enhance_or_suppress_features.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/enhance_or_suppress_features.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/export_to_spreadsheet.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/export_to_spreadsheet.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/export_to_spreadsheet_create_gene_image_filename.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/export_to_spreadsheet_create_gene_image_filename.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -64,13 +64,13 @@
     Select source of sample row name:Image filename
     Select the image to use as the identifier:DNA
     Select the metadata to use as the identifier:None
-    Export all measurement types?:No
+    Export all measurement types?:Yes
     Press button to select measurements:
     Representation of Nan/Inf:NaN
     Add a prefix to file names?:Yes
     Filename prefix:MyExpt_
     Overwrite existing files without warning?:Yes
-    Data to export:Image
+    Data to export:Do not use
     Combine these object measurements with those of the previous object?:No
-    File name:data.csv
-    Use the object name for the file name?:No
+    File name:DATA.csv
+    Use the object name for the file name?:Yes
--- a/test-data/export_to_spreadsheet_create_gene_metadata.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/export_to_spreadsheet_create_gene_metadata.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/export_to_spreadsheet_multi.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/export_to_spreadsheet_multi.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -64,17 +64,13 @@
     Select source of sample row name:Image filename
     Select the image to use as the identifier:DNA
     Select the metadata to use as the identifier:None
-    Export all measurement types?:No
+    Export all measurement types?:Yes
     Press button to select measurements:
     Representation of Nan/Inf:NaN
     Add a prefix to file names?:Yes
     Filename prefix:MyExpt_
     Overwrite existing files without warning?:Yes
-    Data to export:Image
-    Combine these object measurements with those of the previous object?:No
-    File name:data.csv
-    Use the object name for the file name?:No
-    Data to export:Experiment
+    Data to export:Do not use
     Combine these object measurements with those of the previous object?:No
     File name:DATA.csv
     Use the object name for the file name?:Yes
--- a/test-data/gray_to_color.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/gray_to_color.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/identify_primary_objects.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/identify_primary_objects.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -74,7 +74,7 @@
     Thresholding method:Otsu
     Threshold smoothing scale:1.3488
     Threshold correction factor:0.9
-    Lower and upper bounds on threshold:0.0,1.0
+    Lower and upper bounds on threshold:0.0000,1.0000
     Manual threshold:0
     Select the measurement to threshold with:None
     Two-class or three-class thresholding?:Two classes
--- a/test-data/identify_primary_objects_adv_adaptive_otsu.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/identify_primary_objects_adv_adaptive_otsu.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -74,7 +74,7 @@
     Thresholding method:Otsu
     Threshold smoothing scale:1.5000
     Threshold correction factor:1.0
-    Lower and upper bounds on threshold:0.0,1.0
+    Lower and upper bounds on threshold:0.0000,1.0000
     Manual threshold:0
     Select the measurement to threshold with:None
     Two-class or three-class thresholding?:Three classes
--- a/test-data/identify_primary_objects_adv_global_manual.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/identify_primary_objects_adv_global_manual.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -74,7 +74,7 @@
     Thresholding method:Manual
     Threshold smoothing scale:1.3488
     Threshold correction factor:1.0
-    Lower and upper bounds on threshold:0.0,1.0
+    Lower and upper bounds on threshold:0.0000,1.0000
     Manual threshold:1
     Select the measurement to threshold with:None
     Two-class or three-class thresholding?:Two classes
--- a/test-data/identify_primary_objects_adv_global_mce.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/identify_primary_objects_adv_global_mce.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -74,7 +74,7 @@
     Thresholding method:Minimum cross entropy
     Threshold smoothing scale:1.5000
     Threshold correction factor:1.0
-    Lower and upper bounds on threshold:0.0,1.0
+    Lower and upper bounds on threshold:0.0000,1.0000
     Manual threshold:0
     Select the measurement to threshold with:None
     Two-class or three-class thresholding?:Two classes
--- a/test-data/identify_primary_objects_adv_global_measurement.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/identify_primary_objects_adv_global_measurement.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -74,7 +74,7 @@
     Thresholding method:Measurement
     Threshold smoothing scale:1.3488
     Threshold correction factor:1.0
-    Lower and upper bounds on threshold:0.1,0.4
+    Lower and upper bounds on threshold:0.1000,0.4000
     Manual threshold:0
     Select the measurement to threshold with:FileName_DNA
     Two-class or three-class thresholding?:Two classes
--- a/test-data/identify_primary_objects_adv_global_rb.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/identify_primary_objects_adv_global_rb.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -74,7 +74,7 @@
     Thresholding method:RobustBackground
     Threshold smoothing scale:1.4000
     Threshold correction factor:1.0
-    Lower and upper bounds on threshold:0.0,1.0
+    Lower and upper bounds on threshold:0.0000,1.0000
     Manual threshold:0
     Select the measurement to threshold with:None
     Two-class or three-class thresholding?:Two classes
--- a/test-data/identify_primary_objects_noadv.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/identify_primary_objects_noadv.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -74,7 +74,7 @@
     Thresholding method:Minimum cross entropy
     Threshold smoothing scale:1.3488
     Threshold correction factor:1.0
-    Lower and upper bounds on threshold:0.0,1.0
+    Lower and upper bounds on threshold:0.0000,1.0000
     Manual threshold:0
     Select the measurement to threshold with:None
     Two-class or three-class thresholding?:Two classes
--- a/test-data/image_math_1.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/image_math_1.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:7
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/image_math_2.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/image_math_2.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:7
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/image_math_3.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/image_math_3.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:7
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/mask_image.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/mask_image.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/measure_granularity.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/measure_granularity.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/measure_image_area_occupied.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/measure_image_area_occupied.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/measure_image_intensity.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/measure_image_intensity.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/measure_image_quality.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/measure_image_quality.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/measure_object_intensity.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/measure_object_intensity.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/measure_object_size_shape.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/measure_object_size_shape.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/measure_texture.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/measure_texture.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/overlay_outlines.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/overlay_outlines.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/overlay_outlines_blank_color.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/overlay_outlines_blank_color.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/overlay_outlines_blank_grayscale.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/overlay_outlines_blank_grayscale.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/overlay_outlines_non_blank_color.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/overlay_outlines_non_blank_color.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/overlay_outlines_non_blank_grayscale.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/overlay_outlines_non_blank_grayscale.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/relate_objects.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/relate_objects.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/save_images.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/save_images.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/tile.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/tile.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -65,4 +65,3 @@
     Automatically calculate number of columns?:Yes
     Select an additional image to tile:OutlineImage
     Select an additional image to tile:TrackedCells
-
--- a/test-data/tile_across_cycles.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/tile_across_cycles.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -63,4 +63,3 @@
     Use meander mode?:No
     Automatically calculate number of rows?:Yes
     Automatically calculate number of columns?:No
-
--- a/test-data/tile_across_cyles.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/tile_across_cyles.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
--- a/test-data/track_object.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/track_object.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -82,4 +82,3 @@
     Use advanced configuration parameters:No
     Cost of cell to empty matching:15.0
     Weight of area difference in function matching cost:25.0
-
--- a/test-data/track_object_distance_no_filter_min.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/track_object_distance_no_filter_min.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -82,4 +82,3 @@
     Use advanced configuration parameters:No
     Cost of cell to empty matching:15.0
     Weight of area difference in function matching cost:25.0
-
--- a/test-data/track_object_follow_neighbors.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/track_object_follow_neighbors.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -82,4 +82,3 @@
     Use advanced configuration parameters:Yes
     Cost of cell to empty matching:11.0
     Weight of area difference in function matching cost:20.0
-
--- a/test-data/track_object_lap_velocity.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/track_object_lap_velocity.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -82,4 +82,3 @@
     Use advanced configuration parameters:No
     Cost of cell to empty matching:15.0
     Weight of area difference in function matching cost:25.0
-
--- a/test-data/track_object_measurement_intensity.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/track_object_measurement_intensity.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -82,4 +82,3 @@
     Use advanced configuration parameters:No
     Cost of cell to empty matching:15.0
     Weight of area difference in function matching cost:25.0
-
--- a/test-data/track_object_overlap_no_filter_max.cppipe	Sat Feb 06 09:43:49 2021 +0000
+++ b/test-data/track_object_overlap_no_filter_max.cppipe	Fri Feb 26 13:50:41 2021 +0000
@@ -5,12 +5,12 @@
 ModuleCount:5
 HasImagePlaneDetails:False
 
-Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Images:[module_num:1|svn_version:\'Unknown\'|variable_revision_number:2|show_window:False|notes:\x5B\'To begin creating your project, use the Images module to compile a list of files and/or folders that you want to analyze. You can also specify a set of rules to include only the desired files in your selected folders.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     :
     Filter images?:Images only
     Select the rule criteria:and (extension does isimage) (directory doesnot startwith ".")
 
-Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\']|batch_state:array([], dtype=uint8)|enabled:True|wants_pause:False]
+Metadata:[module_num:2|svn_version:\'Unknown\'|variable_revision_number:4|show_window:False|notes:\x5B\'The Metadata module optionally allows you to extract information describing your images (i.e, metadata) which will be stored along with your measurements. This information can be contained in the file name and/or location, or in an external file.\'\x5D|batch_state:array(\x5B\x5D, dtype=uint8)|enabled:True|wants_pause:False]
     Extract metadata?:Yes
     Metadata data type:Text
     Metadata types:{}
@@ -82,4 +82,3 @@
     Use advanced configuration parameters:No
     Cost of cell to empty matching:15.0
     Weight of area difference in function matching cost:25.0
-
--- a/tile.py	Sat Feb 06 09:43:49 2021 +0000
+++ b/tile.py	Fri Feb 26 13:50:41 2021 +0000
@@ -68,7 +68,7 @@
             result += INDENTATION.join(
                 [f"{INDENTATION}Select an additional image to tile:{get_json_value(img, 'additional_img')}\n"
                  ])
-
+    result = result.rstrip("\n")
     return result
 
 
--- a/track_objects.py	Sat Feb 06 09:43:49 2021 +0000
+++ b/track_objects.py	Fri Feb 26 13:50:41 2021 +0000
@@ -167,7 +167,7 @@
          f"Cost of cell to empty matching:{cost_of_cell}\n",
          f"Weight of area difference in function matching cost:{weight_of_area_diff}\n"
          ])
-
+    result = result.rstrip("\n")
     return result