Mercurial > repos > bgruening > augustus

diff augustus.xml @ 12:48528e640fe6 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/augustus commit 211061259f97dfbeb080aaf4713a21f64a1742e1"
author iuc
date Fri, 20 Dec 2019 19:07:47 +0000
parents e519d7b4f9ac
children 66c8e9d8d1c4
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line diff
--- a/augustus.xml	Thu May 23 18:15:55 2019 -0400
+++ b/augustus.xml	Fri Dec 20 19:07:47 2019 +0000
@@ -10,7 +10,7 @@
 
             ## Using an augustus model from history, we need to unzip it and let augustus find it
 
-            cp -r "\$AUGUSTUS_CONFIG_PATH/" augustus_dir/ &&
+            cp -r `command -v augustus | xargs dirname`/../config/ augustus_dir/ &&
 
             mkdir -p 'augustus_dir/species/' &&