Mercurial > repos > bgruening > antismash

changeset 3:6b523e1f7acc draft

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Uploaded
author bgruening
date Fri, 04 Oct 2013 04:22:38 -0400
parents 929cf8979901
children 9b91d26ee080
files tool_dependencies.xml
diffstat 1 files changed, 15 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Fri Oct 04 03:38:29 2013 -0400
+++ b/tool_dependencies.xml	Fri Oct 04 04:22:38 2013 -0400
@@ -36,6 +36,11 @@
                     <action type="chmod">
                         <file mode="750">$INSTALL_DIR/run_antismash.py</file>
                     </action>
+                    <action type="download_by_url">https://bitbucket.org/antismash/antismash2/downloads/clusterblast.tar.gz</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR/antismash/generic_modules/clusterblast</destination_directory>
+                    </action>
                 </actions>
                 <!-- Download the binaries for AntiSmash compatible with 32-bit Linux. -->
                 <actions architecture="i386" os="linux">
@@ -49,6 +54,16 @@
                     </action>
                 </actions>
 
+                <actions>
+                    <action type="download_by_url">https://bitbucket.org/antismash/antismash2/downloads/antismash-2.0.2.x86_64.tar.bz2</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR</destination_directory>
+                    </action>
+                    <action type="chmod">
+                        <file mode="750">$INSTALL_DIR/run_antismash.py</file>
+                    </action>
+                </actions>
 
 
                 <action type="setup_virtualenv">biopython=1.62