Mercurial > repos > bgruening > antismash
annotate readme.rst @ 27:ab3eff2028f8 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/antismash commit 654a4f3b3a1602cec2510d51fb953fd456427e08
| author | bgruening |
|---|---|
| date | Wed, 07 Feb 2018 06:21:45 -0500 |
| parents | a5eb6fad2a76 |
| children |
| rev | line source |
|---|---|
| 26 | 1 Galaxy wrapper for AntiSmash |
| 2 ===================================== | |
| 3 | |
| 4 This wrapper is copyright 2012-2014 by Björn Grüning. | |
| 5 | |
| 6 This is a wrapper for the command line tool of antiSMASH. | |
| 7 | |
| 8 antiSMASH allows the rapid genome-wide identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genomes. | |
| 9 It integrates and cross-links with a large number of in silico secondary metabolite analysis tools. | |
| 10 | |
| 11 http://antismash.secondarymetabolites.org/ | |
| 12 | |
| 13 Marnix H. Medema, Kai Blin, Peter Cimermancic, Victor de Jager, Piotr Zakrzewski, Michael A. Fischbach, Tilmann Weber, Rainer Breitling & Eriko Takano (2011). | |
| 14 antiSMASH: Rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters. Nucleic Acids Research 39: W339-W346. | |
| 15 | |
| 16 | |
| 17 Installation | |
| 18 ============ | |
| 19 | |
|
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ab3eff2028f8
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/antismash commit 654a4f3b3a1602cec2510d51fb953fd456427e08
bgruening
parents:
26
diff
changeset
|
20 Galaxy should be able to automatically install the dependencies using conda |
| 26 | 21 |
| 22 History | |
| 23 ======= | |
| 24 | |
|
27
ab3eff2028f8
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/antismash commit 654a4f3b3a1602cec2510d51fb953fd456427e08
bgruening
parents:
26
diff
changeset
|
25 v0.2 - Antismash update 4.0.2 |
| 26 | 26 v0.1 - Initial public release |
| 27 | |
| 28 | |
| 29 Licence (MIT) | |
| 30 ============= | |
| 31 | |
| 32 Permission is hereby granted, free of charge, to any person obtaining a copy | |
| 33 of this software and associated documentation files (the "Software"), to deal | |
| 34 in the Software without restriction, including without limitation the rights | |
| 35 to use, copy, modify, merge, publish, distribute, sublicense, and/or sell | |
| 36 copies of the Software, and to permit persons to whom the Software is | |
| 37 furnished to do so, subject to the following conditions: | |
| 38 | |
| 39 The above copyright notice and this permission notice shall be included in | |
| 40 all copies or substantial portions of the Software. | |
| 41 | |
| 42 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR | |
| 43 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, | |
| 44 FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE | |
| 45 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER | |
| 46 LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, | |
| 47 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN | |
| 48 THE SOFTWARE. |