Mercurial > repos > bernhardlutz > rest_tool

changeset 10:a76d64d2ed44 draft default tip

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Uploaded
author bernhardlutz
date Sun, 04 May 2014 14:21:30 -0400
parents 80bf0039c0dc
children
files rest_tool.xml
diffstat 1 files changed, 4 insertions(+), 9 deletions(-) [+]
line wrap: on
line diff
--- a/rest_tool.xml	Fri May 02 18:16:36 2014 -0400
+++ b/rest_tool.xml	Sun May 04 14:21:30 2014 -0400
@@ -1,9 +1,6 @@
 <tool id="rest_tool" name="Fetch Data from pubchem" version="0.1.0">
     <description>Fetch pubchem data</description>
     <version_command>echo "0.1.0"</version_command>
-    <requirements>
-        <requirement type="set_environment">REST_TOOL_SCRIPT_PATH</requirement>
-    </requirements>
     <macros>
         <import>rest_tool_macros.xml</import>
         <import>rest_tool_macro_advanced.xml</import>
@@ -222,7 +219,7 @@
             <param name="choose_action.input_type.operation_assay.operation_assay_select" value="aids" />
         </test>
         <test>
-            <output name="output2">
+            <output name="output">
                 <assert_contents>
                     <has_n_columns n="1" />
                     <has_line_matching expression="[0-9]+" />
@@ -237,7 +234,7 @@
         </test>
         <!-- post test -->
         <test>
-            <output name="output3">
+            <output name="output">
                 <assert_contents>
                     <has_n_columns n="1" />
                     <has_line_matching expression="[0-9]+" />
@@ -251,17 +248,15 @@
             <param name="choose_action.input_type.operation_substance.operation_substance_select_select" value="cids" />
         </test>
         <test>
-            <output name="output4">
+            <output name="output">
                 <assert_contents>
                     <has_n_columns n="1" />
                     <has_line_matching expression="[0-9]+" />
                 </assert_contents>
             </output>
             <param name="choose_action.action" value="compounds_for_assay" />
-            <param name="choose_action.input_type.input_type_select" value="compound" />
-            <param name="choose_action.input_type.namespace_id.namespace_id_select" value="inchi" />
             <param name="choose_action.input_type.namespace_id.field_or_file.field_or_file_select" value="file" />
-            <param name="choose_action.input_type.namespace_id.field_or_file.id_value" value="postfile" />
+            <param name="choose_action.input_type.namespace_id.field_or_file.id_value" value="12345" />
             <param name="choose_action.input_type.operation_substance.operation_substance_select_select" value="cids" />
         </test>
     </tests>