Mercurial > repos > bernhardlutz > exparna

changeset 4:ee3d71cb8dc8 draft

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Uploaded
author bernhardlutz
date Tue, 31 Dec 2013 06:59:39 -0500
parents 8c7e7f914a53
children b75c2fe4cf88
files tool_dependencies.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Sat Dec 28 15:15:22 2013 -0500
+++ b/tool_dependencies.xml	Tue Dec 31 06:59:39 2013 -0500
@@ -1,18 +1,18 @@
 <?xml version="1.0"?>
 <tool_dependency>
     <package name="vienna_rna" version="1.8.5">
-        <repository changeset_revision="53e25262a701" name="package_vienna_rna_1_8" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="18c7086dbb43" name="package_vienna_rna_1_8" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="exparna" version="1.0">
         <install version="1.0">
             <actions>
                 <action type="download_by_url">http://www.bioinf.uni-freiburg.de/Software/expaRNA/exparna-1.0.tar.gz</action>
                 <action type="set_environment_for_install">
-                    <repository changeset_revision="53e25262a701" name="package_vienna_rna_1_8" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="18c7086dbb43" name="package_vienna_rna_1_8" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu">
                         <package name="vienna_rna" version="1.8.5" />
                     </repository>
                 </action>
-                <action type="shell_command">./configure --prefix $INSTALL_DIR --with-RNA=\$ROOT_VIENNA_RNA_DIR</action>
+                <action type="shell_command">./configure --prefix $INSTALL_DIR --with-RNA=$ROOT_VIENNA_RNA_DIR</action>
                 <action type="make_install" />
                 <action type="move_file">
                     <source>create_html.py</source>