Mercurial > repos > bebatut > plot_grouped_barplot
changeset 2:7cdad1c7d6ea draft default tip
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_grouped_barplot commit c6ba903395dc6d41cb318c7d95a2d9cf3ca65313-dirty
| author | bebatut |
|---|---|
| date | Mon, 18 Apr 2016 10:05:48 -0400 |
| parents | ed13c93bfdf0 |
| children | |
| files | plot_grouped_barplot.xml test-data/input_file.txt test-data/output.pdf test-data/output_file.pdf |
| diffstat | 4 files changed, 27 insertions(+), 7 deletions(-) [+] |
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--- a/plot_grouped_barplot.xml Fri Apr 15 05:40:22 2016 -0400 +++ b/plot_grouped_barplot.xml Mon Apr 18 10:05:48 2016 -0400 @@ -105,18 +105,39 @@ </outputs> <tests> + <test> + <param name="input_file" value="input_file.txt"/> + <param name='header' value="FALSE"/> + <param name="output_format" value="pdf"/> + <param name="samples_0|name" value="A"/> + <param name="samples_0|column_id" value="2"/> + <param name="samples_0|color" value="blue"/> + <param name="samples_1|name" value="B"/> + <param name="samples_1|column_id" value="3"/> + <param name="samples_1|color" value="red"/> + <param name="replace_null" value="FALSE"/> + <param name="order" value="FALSE"/> + <param name="names_column" value="1"/> + <param name='xlab' value=""/> + <param name='log' value="FALSE"/> + <param name='bottom_margin' value="5"/> + <param name="left_margin" value="19"/> + <param name='top_margin' value="1"/> + <param name='right_margin' value="1"/> + <param name="legend_pos" value="topright"/> + <output name="output_pdf_file" file="output_file.pdf"/> + </test> </tests> <help><![CDATA[ - **What it does** +**What it does** - This tool plot a grouped barplot from a tabular file into different format files given different customizable parameters: +This tool plot a grouped barplot with multiple data: - .. image:: $PATH_TO_IMAGES/output.png - :scale: 50 % +.. image:: $PATH_TO_IMAGES/output.png + :scale: 50 % - This tool relies on R's barplot function. - +This tool relies on R's barplot function. The input file must be a tabular file with multiple columns: a column with row names (for bar names) and a least a column with data. The output image is customizable (margin, legend positions, ...) and can be export in different format. ]]></help> <citations>