Mercurial > repos > bebatut > plot_grouped_barplot
comparison plot_grouped_barplot.xml @ 2:7cdad1c7d6ea draft default tip
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_grouped_barplot commit c6ba903395dc6d41cb318c7d95a2d9cf3ca65313-dirty
author | bebatut |
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date | Mon, 18 Apr 2016 10:05:48 -0400 |
parents | ed13c93bfdf0 |
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1:ed13c93bfdf0 | 2:7cdad1c7d6ea |
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103 <filter>output_format=="svg"</filter> | 103 <filter>output_format=="svg"</filter> |
104 </data> | 104 </data> |
105 </outputs> | 105 </outputs> |
106 | 106 |
107 <tests> | 107 <tests> |
108 <test> | |
109 <param name="input_file" value="input_file.txt"/> | |
110 <param name='header' value="FALSE"/> | |
111 <param name="output_format" value="pdf"/> | |
112 <param name="samples_0|name" value="A"/> | |
113 <param name="samples_0|column_id" value="2"/> | |
114 <param name="samples_0|color" value="blue"/> | |
115 <param name="samples_1|name" value="B"/> | |
116 <param name="samples_1|column_id" value="3"/> | |
117 <param name="samples_1|color" value="red"/> | |
118 <param name="replace_null" value="FALSE"/> | |
119 <param name="order" value="FALSE"/> | |
120 <param name="names_column" value="1"/> | |
121 <param name='xlab' value=""/> | |
122 <param name='log' value="FALSE"/> | |
123 <param name='bottom_margin' value="5"/> | |
124 <param name="left_margin" value="19"/> | |
125 <param name='top_margin' value="1"/> | |
126 <param name='right_margin' value="1"/> | |
127 <param name="legend_pos" value="topright"/> | |
128 <output name="output_pdf_file" file="output_file.pdf"/> | |
129 </test> | |
108 </tests> | 130 </tests> |
109 | 131 |
110 <help><![CDATA[ | 132 <help><![CDATA[ |
111 **What it does** | 133 **What it does** |
112 | 134 |
113 This tool plot a grouped barplot from a tabular file into different format files given different customizable parameters: | 135 This tool plot a grouped barplot with multiple data: |
114 | 136 |
115 .. image:: $PATH_TO_IMAGES/output.png | 137 .. image:: $PATH_TO_IMAGES/output.png |
116 :scale: 50 % | 138 :scale: 50 % |
117 | 139 |
118 This tool relies on R's barplot function. | 140 This tool relies on R's barplot function. The input file must be a tabular file with multiple columns: a column with row names (for bar names) and a least a column with data. The output image is customizable (margin, legend positions, ...) and can be export in different format. |
119 | |
120 ]]></help> | 141 ]]></help> |
121 | 142 |
122 <citations> | 143 <citations> |
123 </citations> | 144 </citations> |
124 </tool> | 145 </tool> |