Mercurial > repos > bebatut > metaphlan2

changeset 24:51e7d53fcefb draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/sortmerna/ commit 5edd9d9fd2f64ad6f1785e1cbf15f73ed4a42044-dirty
author bebatut
date Wed, 09 Dec 2015 11:48:33 -0500
parents 62f9857766e6
children e8e0f835b4b6
files tool_dependencies.xml
diffstat 1 files changed, 1 insertions(+), 14 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue Dec 08 09:05:02 2015 -0500
+++ b/tool_dependencies.xml	Wed Dec 09 11:48:33 2015 -0500
@@ -4,19 +4,6 @@
         <repository changeset_revision="f5582ac5ba3c" name="package_bowtie_2_2_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="metaphlan2" version="2.0">
-        <install version="1.0">
-            <actions>
-                <action type="download_by_url">https://bitbucket.org/biobakery/metaphlan2/get/default.zip</action>
-                <action type="move_directory_files">
-                    <source_directory>.</source_directory>
-                    <destination_directory>$INSTALL_DIR/</destination_directory>
-                </action>
-                <action type="set_environment">
-                    <environment_variable action="set_to" name="METAPHLAN2_DIR">$INSTALL_DIR/</environment_variable>
-                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
-                </action>
-            </actions>
-        </install>
-        <readme />
+        <repository changeset_revision="906e1ca45fe2" name="package_metaphlan_2_0" owner="bebatut" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>