Mercurial > repos > bebatut > humann2

changeset 26:391f2752370c draft default tip

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'cdcc4b879fb57e97a578a767f268a8dbaa961212\n'-dirty
author bebatut
date Fri, 03 Mar 2017 07:40:11 -0500
parents a48c72755597
children
files humann2.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/humann2.xml	Fri Mar 03 07:33:48 2017 -0500
+++ b/humann2.xml	Fri Mar 03 07:40:11 2017 -0500
@@ -64,8 +64,8 @@
                 --taxonomic-profile '$taxo_profile.taxonomic_profile'
             #else
                 #if $taxo_profile.metaphlan2_db_choice.metaphlan2_db_selector == "history"
-                    #set $metaphlan_option += " --bowtie2db " + ref_db/ref_db
-                    #set $metaphlan_option += " --mpa_pkl " + ref_db/metadata.pkl
+                    #set $metaphlan_option += " --bowtie2db " + 'ref_db/ref_db'
+                    #set $metaphlan_option += " --mpa_pkl " + 'ref_db/metadata.pkl'
                 #else
                     #set $path = $taxo_profile.metaphlan2_db_choice.cached_db.fields.path
                     #set $value = $taxo_profile.metaphlan2_db_choice.cached_db.fields.value