Mercurial > repos > bebatut > data_manager_qiime_database_downloader
changeset 10:5c3bf1589fcf draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_qiime_database_downloader commit 9a8e5333c047c6a5c18ca8f139a979704644ad87-dirty
| author | bebatut |
|---|---|
| date | Thu, 04 May 2017 14:31:25 -0400 |
| parents | 12695cdff13f |
| children | 8ff075db547a |
| files | data_manager_conf.xml |
| diffstat | 1 files changed, 12 insertions(+), 12 deletions(-) [+] |
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--- a/data_manager_conf.xml Thu May 04 09:43:00 2017 -0400 +++ b/data_manager_conf.xml Thu May 04 14:31:25 2017 -0400 @@ -7,11 +7,11 @@ <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool --> <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool --> <column name="path" output_ref="out_file" > - <move type="directory"> + <move type="file"> <source>${path}</source> - <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">qiime/rep_set/</target> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">qiime_rep_set/${dbkey}</target> </move> - <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/qiime/rep_set/${dbkey}</value_translation> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/qiime_rep_set/${dbkey}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> @@ -22,11 +22,11 @@ <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool --> <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool --> <column name="path" output_ref="out_file" > - <move type="directory"> + <move type="file"> <source>${path}</source> - <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">qiime/rep_set_aligned/</target> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">qiime_rep_set_aligned/${dbkey}</target> </move> - <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/qiime/rep_set_aligned/${dbkey}</value_translation> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/qiime_rep_set_aligned/${dbkey}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> @@ -37,11 +37,11 @@ <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool --> <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool --> <column name="path" output_ref="out_file" > - <move type="directory"> + <move type="file"> <source>${path}</source> - <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">qiime/taxonomy/</target> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">qiime_taxonomy/${dbkey}</target> </move> - <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/qiime/taxonomy/${dbkey}</value_translation> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/qiime_taxonomy/${dbkey}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> @@ -52,11 +52,11 @@ <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool --> <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool --> <column name="path" output_ref="out_file" > - <move type="directory"> + <move type="file"> <source>${path}</source> - <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">qiime/trees/</target> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">qiime_trees/${dbkey}</target> </move> - <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/qiime/trees/${dbkey}</value_translation> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/qiime_trees/${dbkey}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output>