Mercurial > repos > artbio > rsem

changeset 9:cf60c3338279 draft

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planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit 62e8088d5f73cbb9b2f93e23a74636c77a06b492
author artbio
date Sun, 01 Apr 2018 18:10:44 -0400
parents 8d36aa9727b5
children 6aba6cca3fab
files rsem-bwt2.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/rsem-bwt2.xml	Sun Apr 01 17:59:09 2018 -0400
+++ b/rsem-bwt2.xml	Sun Apr 01 18:10:44 2018 -0400
@@ -241,7 +241,7 @@
             <option value="self">Prepare RSEM Reference with this tool</option>
           </param>
           <when value="history">
-            <param name="rsem_ref" type="data" format="rsem_ref" label="RSEM reference" />
+            <param name="rsem_ref" type="data" format="rsem_bt2_ref" label="RSEM reference" />
           </when>
           <when value="self">
           </when>
@@ -321,7 +321,7 @@
   </inputs>
 
   <outputs>
-    <data format="rsem_ref" name="reference_file" label="RSEM ${job.reference_name} reference">
+    <data format="rsem_bt2_ref" name="reference_file" label="RSEM ${job.reference_name} reference">
       <filter>job['select_job'] == "index"</filter>
     </data>
     <data format="tabular" name="gene_abundances" label="${run_rsem.sample}.gene_abundances" from_work_dir="rsem_output.genes.results">