Mercurial > repos > artbio > rsem
changeset 8:8d36aa9727b5 draft
planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit 6fe1a0e6ffe85b57e533913ad58f3b822241574f
| author | artbio |
|---|---|
| date | Sun, 01 Apr 2018 17:59:09 -0400 |
| parents | 20e2c68f776a |
| children | cf60c3338279 |
| files | extract_transcript_to_gene_map_from_trinity.xml macros.xml |
| diffstat | 2 files changed, 4 insertions(+), 1 deletions(-) [+] |
line wrap: on
line diff
--- a/extract_transcript_to_gene_map_from_trinity.xml Sun Apr 01 17:53:57 2018 -0400 +++ b/extract_transcript_to_gene_map_from_trinity.xml Sun Apr 01 17:59:09 2018 -0400 @@ -1,5 +1,8 @@ <tool id="extract_transcript_to_gene_map_from_trinity" name="RSEM trinity fasta to gene map" version="@WRAPPER_VERSION@"> <description>extract transcript to gene map from trinity</description> + <macros> + <import>macros.xml</import> + </macros> <requirements> <requirement type="package" version="1.3.0">rsem</requirement> </requirements>
--- a/macros.xml Sun Apr 01 17:53:57 2018 -0400 +++ b/macros.xml Sun Apr 01 17:59:09 2018 -0400 @@ -1,6 +1,6 @@ <?xml version="1.0"?> <macros> - <token name="@WRAPPER_VERSION@">0.5.0</token> + <token name="@WRAPPER_VERSION@">0.5.1</token> <xml name="rsem_options"> <param name="seedlength" type="integer" value="25" optional="true" label="Seed length used by the read aligner" help="Providing the correct value for this parameter is important for RSEM's accuracy if the data are single-end reads. RSEM uses this value for Bowtie's seed length parameter. The minimum value is 25. (Default:25)"> </param>