diff extract_transcript_to_gene_map_from_trinity.xml @ 7:20e2c68f776a draft

planemo upload for repository https://github.com/artbio/tools-artbio/tree/master/tools/rsem commit 755333360ac6714c4db1eefeffe0bf0a730a94c7

--- a/extract_transcript_to_gene_map_from_trinity.xml	Sat Mar 31 12:18:07 2018 -0400
+++ b/extract_transcript_to_gene_map_from_trinity.xml	Sun Apr 01 17:53:57 2018 -0400
@@ -1,18 +1,17 @@
-<tool id="extract_transcript_to_gene_map_from_trinity" name="RSEM trinity fasta to gene map" version="0.4.0">
+<tool id="extract_transcript_to_gene_map_from_trinity" name="RSEM trinity fasta to gene map" version="@WRAPPER_VERSION@">
   <description>extract transcript to gene map from trinity</description>
   <requirements>
     <requirement type="package" version="1.3.0">rsem</requirement>
   </requirements>
+  <stdio>
+    <exit_code range="1:"  level="fatal" description="Error Running RSEM" />
+  </stdio>
   <command>
     extract-transcript-to-gene-map-from-trinity $trinity_fasta_file $map_file
   </command>
-
   <inputs>
     <param name="trinity_fasta_file" type="data" format="fasta" label="Trinity fasta file" />
   </inputs>
-  <stdio>
-    <exit_code range="1:"  level="fatal" description="Error Running RSEM" />
-  </stdio>
   <outputs>
     <data format="tabular" name="map_file" label="${tool.name} on ${on_string}: gene map file"/>
   </outputs>