Mercurial > repos > adam-novak > hexagram
changeset 3:4da9023185a9 draft
Working around comment in tool config bug.
| author | adam-novak |
|---|---|
| date | Thu, 13 Jun 2013 18:14:40 -0400 |
| parents | d9bcb6bc9e47 |
| children | 6b6c1a0a452e |
| files | hexagram/tool_dependencies.xml |
| diffstat | 1 files changed, 11 insertions(+), 3 deletions(-) [+] |
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--- a/hexagram/tool_dependencies.xml Thu Jun 13 16:48:24 2013 -0400 +++ b/hexagram/tool_dependencies.xml Thu Jun 13 18:14:40 2013 -0400 @@ -10,8 +10,8 @@ <actions> <action type="shell_command">hg clone https://bitbucket.org/adam_novak/drl-graph-layout</action> <!-- - TODO: We're supposed to copy the right Configuration.mk file. - Not doing so assumes our system is GNU + TODO: We're supposed to copy the right Configuration.mk + file. Not doing so assumes our system is GNU. --> <action type="shell_command">hg up -r drl-graph-layout-1.1</action> <action type="shell_command">make</action> @@ -19,9 +19,17 @@ <source_directory>bin</source_directory> <destination_directory>$INSTALL_DIR/bin</destination_directory> </action> + <!-- + Now we can access DrL tools like truncate (at the expense of + GNU truncate) + --> + <!-- + TODO: report to Galaxy that comments as the last element of + a set_enviromnent action atag are not properly handeled. + See install_util.py line 435 in Galaxy revision 9d42f1e32efb + --> <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> - <!-- Now we can access DrL tools like truncate (at the expense of GNU truncate) --> </action> </actions> </install>