Mercurial > repos > abims-sbr > pairwise

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planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 3c7982d775b6f3b472f6514d791edcb43cd258a1
author lecorguille
date Mon, 24 Sep 2018 03:56:40 -0400
parents 5f68b2fc02c1
children
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5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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1 Pair of species:
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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2 ('PfPfiji_Trinity.fasta', 'ApApomp_Trinity.fasta')
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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3 Pair of species:
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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4 ('PfPfiji_Trinity.fasta', 'AmAmphi_Trinity.fasta')
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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5 Pair of species:
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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6 ('PfPfiji_Trinity.fasta', 'AcAcaud_Trinity.fasta')
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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7 Pair of species:
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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8 ('ApApomp_Trinity.fasta', 'AmAmphi_Trinity.fasta')
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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9 Pair of species:
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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10 ('ApApomp_Trinity.fasta', 'AcAcaud_Trinity.fasta')
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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11 Pair of species:
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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12 ('AmAmphi_Trinity.fasta', 'AcAcaud_Trinity.fasta')
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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13 -------------------- Pairwise PfPfiji_AmAmphi --------------------
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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15 database : PfPfiji_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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16 query file : AmAmphi_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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18 ***** RUN FIRST BLAST *****
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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21 database : AmAmphi_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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22 query file : only the sequences of PfPfiji_Trinity.fasta which matched during the last BLAST
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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24 ***** RUN SECOND BLAST *****
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27 Number of pairwises parsed = 2
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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31 -------------------- Pairwise AmAmphi_AcAcaud --------------------
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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33 database : AmAmphi_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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34 query file : AcAcaud_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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36 ***** RUN FIRST BLAST *****
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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39 database : AcAcaud_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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40 query file : only the sequences of AmAmphi_Trinity.fasta which matched during the last BLAST
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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42 ***** RUN SECOND BLAST *****
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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45 Number of pairwises parsed = 3
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49 -------------------- Pairwise ApApomp_AmAmphi --------------------
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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51 database : ApApomp_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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52 query file : AmAmphi_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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54 ***** RUN FIRST BLAST *****
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57 database : AmAmphi_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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58 query file : only the sequences of ApApomp_Trinity.fasta which matched during the last BLAST
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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60 ***** RUN SECOND BLAST *****
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63 Number of pairwises parsed = 0
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67 -------------------- Pairwise PfPfiji_ApApomp --------------------
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69 database : PfPfiji_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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70 query file : ApApomp_Trinity.fasta
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72 ***** RUN FIRST BLAST *****
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75 database : ApApomp_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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76 query file : only the sequences of PfPfiji_Trinity.fasta which matched during the last BLAST
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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78 ***** RUN SECOND BLAST *****
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81 Number of pairwises parsed = 5
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85 -------------------- Pairwise PfPfiji_AcAcaud --------------------
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87 database : PfPfiji_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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88 query file : AcAcaud_Trinity.fasta
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90 ***** RUN FIRST BLAST *****
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93 database : AcAcaud_Trinity.fasta
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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94 query file : only the sequences of PfPfiji_Trinity.fasta which matched during the last BLAST
5f68b2fc02c1 planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 44a89d5eeb82789bfc643b33c11f391281b6374b
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96 ***** RUN SECOND BLAST *****
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99 Number of pairwises parsed = 2
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103 -------------------- Pairwise ApApomp_AcAcaud --------------------
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105 database : ApApomp_Trinity.fasta
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106 query file : AcAcaud_Trinity.fasta
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108 ***** RUN FIRST BLAST *****
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111 database : AcAcaud_Trinity.fasta
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112 query file : only the sequences of ApApomp_Trinity.fasta which matched during the last BLAST
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114 ***** RUN SECOND BLAST *****
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117 Number of pairwises parsed = 1
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