Mercurial > repos > abims-sbr > mutcount

diff scripts/S02b_study_seq_composition_nuc.py @ 4:5766f80370e7 draft

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planemo upload for repository htpps://github.com/abims-sbr/adaptearch commit 17acd02c547bd1f7661a846661aa99de9743efe9
author abims-sbr
date Tue, 27 Feb 2018 08:43:50 -0500
parents 988467f963f0
children 0ba551449008
line wrap: on
line diff
--- a/scripts/S02b_study_seq_composition_nuc.py	Wed Jan 17 11:35:37 2018 -0500
+++ b/scripts/S02b_study_seq_composition_nuc.py	Tue Feb 27 08:43:50 2018 -0500
@@ -170,10 +170,10 @@
         fileOUT_percent_purine.write("%.5f," %percent_purine)
         fileOUT_Purine_Load.write("%d,%d,%d,%.5f,%.5f," %(TOTAL, DIFF_GC, DIFF_AT,PLI_GC_1000, PLI_AT_1000))
       else:
-        fileOUT_NUC.write("%s,%s,%s,%s," %("n.a","n.a","n.a","n.a"))
-        fileOUT_percent_GC.write("%s," %"n.a")
-        fileOUT_percent_purine.write("%s," %"n.a")
-        fileOUT_Purine_Load.write("%s,%s,%s,%s,%s," %("n.a","n.a","n.a","n.a","n.a"))
+        fileOUT_NUC.write("%s,%s,%s,%s," %("NA","NA","NA","NA"))
+        fileOUT_percent_GC.write("%s," %"NA")
+        fileOUT_percent_purine.write("%s," %"NA")
+        fileOUT_Purine_Load.write("%s,%s,%s,%s,%s," %("NA","NA","NA","NA","NA"))
         
     fileOUT_NUC.write("\n")
     fileOUT_percent_GC.write("\n")