Mercurial > repos > abims-sbr > filter_assemblies
changeset 7:948864b6ab4b draft
planemo upload for repository https://github.com/abims-sbr/adaptsearch commit 7c9540507076087e858141f9dd5df33409690dac
| author | abims-sbr |
|---|---|
| date | Wed, 28 Feb 2018 06:03:31 -0500 |
| parents | 980b2f36e486 |
| children | 10f70fea57b3 |
| files | filter_assembly.xml |
| diffstat | 1 files changed, 1 insertions(+), 4 deletions(-) [+] |
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--- a/filter_assembly.xml Wed Feb 28 05:37:02 2018 -0500 +++ b/filter_assembly.xml Wed Feb 28 06:03:31 2018 -0500 @@ -1,4 +1,4 @@ -<tool name="Filter assemblies" id="filter_assemblies" version="2.0.2"> +<tool name="Filter assemblies" id="filter_assemblies" version="2.0.3"> <description> Filter the outputs of Velvet or Trinity assemblies @@ -104,8 +104,6 @@ <![CDATA[ ---------- - **Description** This tool reformats Velvet Oases or Trinity assemblies for the AdaptSearch galaxy suite and selects only one variant per gene according to its length and quality check. @@ -137,7 +135,6 @@ **Parameters** - - 'Assembler' : specifies which assembler was used on the input files. - 'Input files' : a collection of fasta files (one file per species). - 'Overlap percent identity cutoff' : cap3 -p parameter : minimum percent identity of an overlap. must be > 65 ; default : 100.